RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GXYLT1Q4G148 440 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 LYSMD4Q5XG99 296 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 DPY19L2P2Q6ZN68 376 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 TIGD4Q8IY51 512 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 C17orf47Q8NEP4 570 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 SNAPC3Q92966 411 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 J3QLW9 94 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 RGS9O75916 674 aaPredicted RBP12.54□□□□□ -0.4
VCP-207ENST00000493886 MT-ND5P03915 603 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 FAM157BP0CG42 384 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 GAAP10253 952 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 ZNF19P17023 458 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 PCP4P48539 62 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 HCCSP53701 268 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 POU4F2Q12837 409 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 ARSKQ6UWY0 536 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 ESPNLQ6ZVH7 1005 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 UBALD2Q8IYN6 164 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 RFLNBQ8N5W9 214 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 OR51L1Q8NGJ5 315 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
VCP-207ENST00000493886 ACOXLQ9NUZ1 547 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 ATXN7L1Q9ULK2 861 aaPredicted RBP12.54□□□□□ -0.4
VCP-207ENST00000493886 MPDZO75970 2070 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 IL12BP29460 328 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 UQCRC1P31930 480 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 NR0B1P51843 470 aaKnown RBP12.54□□□□□ -0.4
VCP-207ENST00000493886 CLDN20P56880 219 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 RPS4XP62701 263 aaKnown RBP12.54□□□□□ -0.4
VCP-207ENST00000493886 ZNF85Q03923 595 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 SCRN3Q0VDG4 424 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 GPR176Q14439 515 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 C16orf54Q6UWD8 224 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 DEDD2Q8WXF8 326 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 ABCG5Q9H222 651 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 SLA2Q9H6Q3 261 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 COPS7AQ9UBW8 275 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 PCDHGB7Q9Y5F8 929 aa12.54□□□□□ -0.4
VCP-207ENST00000493886 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
VCP-207ENST00000493886 ADAMTS20P59510 1910 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 A0A1W2PRG6 482 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ORC5O43913 435 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 HLA-DQB1P01920 261 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 SYPP08247 313 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 GALP22466 123 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 MST1P26927 711 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 HLA-DMAP28067 261 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 EPHA8P29322 1005 aaPredicted RBP12.53□□□□□ -0.4
VCP-207ENST00000493886 GZMKP49863 264 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 SLC25A35Q3KQZ1 300 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 TMEM71Q6P5X7 295 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 DBX2Q6ZNG2 339 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 GPALPP1Q8IXQ4 340 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 OR5W2Q8NH69 310 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ZMYND19Q96E35 227 aaPredicted RBP12.53□□□□□ -0.4
VCP-207ENST00000493886 WWTR1Q9GZV5 400 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 NRIP3Q9NQ35 241 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ZMIZ1Q9ULJ6 1067 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ARPC3O15145 178 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
VCP-207ENST00000493886 GRK6P43250 576 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 AKR1D1P51857 326 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 PRPS1P60891 318 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 RRAS2P62070 204 aaPredicted RBP12.53□□□□□ -0.4
VCP-207ENST00000493886 ACTC1P68032 377 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ACTA1P68133 377 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
VCP-207ENST00000493886 CEACAM19Q7Z692 300 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 OR1N1Q8NGS0 311 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ZFAND1Q8TCF1 268 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 C4orf36Q96KX1 117 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 KLHDC3Q9BQ90 382 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 RTN4RQ9BZR6 473 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 LAT2Q9GZY6 243 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 PRDM6Q9NQX0 595 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 ING3Q9NXR8 418 aa12.53□□□□□ -0.4
VCP-207ENST00000493886 IGF2P01344 180 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 ERP29P30040 261 aaKnown RBP12.52□□□□□ -0.4
VCP-207ENST00000493886 LCN1P31025 176 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 TALDO1P37837 337 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 POU3F4P49335 361 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 OR12D2P58182 307 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 SSTP61278 116 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 ZNF74Q16587 644 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 ZNF574Q6ZN55 896 aaPredicted RBP12.52□□□□□ -0.4
VCP-207ENST00000493886 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 SLC29A4Q7RTT9 530 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 C10orf53Q8N6V4 93 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 BMPERQ8N8U9 685 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 MOSPD2Q8NHP6 518 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 ZNF563Q8TA94 476 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 C12orf57Q99622 126 aa12.52□□□□□ -0.4
VCP-207ENST00000493886 DUSP23Q9BVJ7 150 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms