RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 VKORC1Q9BQB6 163 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 IFT27Q9BW83 186 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 RBM4Q9BWF3 364 aaKnown RBP15.29■□□□□ 0.04
LIME1-208ENST00000493265 OSBPL10Q9BXB5 764 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 PLA2G12AQ9BZM1 189 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 NDEL1Q9GZM8 345 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 C12orf49Q9H741 205 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 B3GAT1Q9P2W7 334 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 POFUT2Q9Y2G5 429 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 CDH10Q9Y6N8 788 aa15.29■□□□□ 0.04
LIME1-208ENST00000493265 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 A0A1W2PRG6 482 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 YES1P07947 543 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 IFNGR1P15260 489 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 CLDN17P56750 224 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 PRPS1P60891 318 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 ERVK-25P63136 954 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 PPP2R2BQ00005 443 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 ZP4Q12836 540 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 COX10Q12887 443 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 MELKQ14680 651 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 RFX4Q33E94 735 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 SLC36A3Q495N2 470 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 TMEM201Q5SNT2 666 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 KDM4DQ6B0I6 523 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 TMEM211Q6ICI0 200 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 CREB3L2Q70SY1 520 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 SLC35D2Q76EJ3 337 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 PXKQ7Z7A4 578 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 OR52L1Q8NGH7 329 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 GMPPAQ96IJ6 420 aaPredicted RBP15.28■□□□□ 0.04
LIME1-208ENST00000493265 TXNDC15Q96J42 360 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 ZNF385AQ96PM9 386 aaKnown RBP15.28■□□□□ 0.04
LIME1-208ENST00000493265 DMRTA2Q96SC8 542 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 EMC6Q9BV81 110 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 KATNB1Q9BVA0 655 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 SF3B5Q9BWJ5 86 aaKnown RBP15.28■□□□□ 0.04
LIME1-208ENST00000493265 POLDIP3Q9BY77 421 aaKnown RBP15.28■□□□□ 0.04
LIME1-208ENST00000493265 RIBC2Q9H4K1 309 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 MED29Q9NX70 200 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 REV1Q9UBZ9 1251 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 TMEFF2Q9UIK5 374 aaPredicted RBP15.28■□□□□ 0.04
LIME1-208ENST00000493265 ING1Q9UK53 422 aaPredicted RBP15.28■□□□□ 0.04
LIME1-208ENST00000493265 ADAM18Q9Y3Q7 739 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 ORC6Q9Y5N6 252 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 NOX1Q9Y5S8 564 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 FLVCR1Q9Y5Y0 555 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 ABCA12Q86UK0 2595 aa15.28■□□□□ 0.04
LIME1-208ENST00000493265 TEP1Q99973 2627 aaKnown RBP15.27■□□□□ 0.04
LIME1-208ENST00000493265 PPP1R3DO95685 299 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 TP53P04637 393 aaPredicted RBP15.27■□□□□ 0.04
LIME1-208ENST00000493265 TSPAN19P0C672 248 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 OSMP13725 252 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 AGTR1P30556 359 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 SLC6A6P31641 620 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 TIMP3P35625 211 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 ALDH3A2P51648 485 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 ZIK1Q3SY52 487 aaPredicted RBP15.27■□□□□ 0.04
LIME1-208ENST00000493265 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 CARD17Q5XLA6 110 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 CASP12Q6UXS9 341 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 CD300LDQ6UXZ3 194 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 NUFIP2Q7Z417 695 aaKnown RBP15.27■□□□□ 0.04
LIME1-208ENST00000493265 CCDC71Q8IV32 467 aaPredicted RBP15.27■□□□□ 0.04
LIME1-208ENST00000493265 IQCF1Q8N6M8 205 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 LRRC75AQ8NAA5 344 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 OR8D4Q8NGM9 314 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 TEX47Q8TBZ9 253 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 DNAJC9Q8WXX5 260 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 RND1Q92730 232 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 TSSK6Q9BXA6 273 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 NOSIPQ9Y314 301 aaKnown RBP15.27■□□□□ 0.04
LIME1-208ENST00000493265 EMC9Q9Y3B6 208 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 IER3IP1Q9Y5U9 82 aa15.27■□□□□ 0.04
LIME1-208ENST00000493265 ARHGAP21Q5T5U3 1957 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 IGKV3D-15A0A087WSY6 115 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 A0A0G2JNJ9 132 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 A0A1B0GUH1 482 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 GPR171O14626 319 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 CASQ2O14958 399 aaPredicted RBP15.26■□□□□ 0.03
LIME1-208ENST00000493265 TRAF3IP2O43734 574 aaPredicted RBP15.26■□□□□ 0.03
LIME1-208ENST00000493265 SS18L1O75177 396 aaPredicted RBP15.26■□□□□ 0.03
LIME1-208ENST00000493265 BCL10O95999 233 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 ALPLP05186 524 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 CEACAM8P31997 349 aaPredicted RBP15.26■□□□□ 0.03
LIME1-208ENST00000493265 SLC16A1P53985 500 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 BIDP55957 195 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 PDK3Q15120 406 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 POU4F3Q15319 338 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 ACKR1Q16570 336 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 RIPPLY2Q5TAB7 128 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 OGFRL1Q5TC84 451 aaPredicted RBP15.26■□□□□ 0.03
LIME1-208ENST00000493265 NIPAL3Q6P499 406 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 AAED1Q7RTV5 226 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 ZIC4Q8N9L1 334 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 NRG4Q8WWG1 115 aa15.26■□□□□ 0.03
LIME1-208ENST00000493265 ERMAPQ96PL5 475 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms