RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 B3GAT1Q9P2W7 334 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 PIEZO2Q9H5I5 2752 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 ACVR1BP36896 505 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.68■□□□□ 0.74
PSPC1-204ENST00000492741 CDK5R2Q13319 367 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 EMC4Q5J8M3 183 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 ZNF324BQ6AW86 544 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-204ENST00000492741 SDR9C7Q8NEX9 313 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 TMEM163Q8TC26 289 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 PNPLA3Q9NST1 481 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 CLN6Q9NWW5 311 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 MED29Q9NX70 200 aa19.68■□□□□ 0.74
PSPC1-204ENST00000492741 PAICSP22234 425 aaKnown RBP19.67■□□□□ 0.74
PSPC1-204ENST00000492741 ACVR2AP27037 513 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 PTGS2P35354 604 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 RASGEF1BQ0VAM2 473 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 KRR1Q13601 381 aaKnown RBP19.67■□□□□ 0.74
PSPC1-204ENST00000492741 EEF1A1P5Q5VTE0 462 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 ZNF786Q8N393 782 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 ARIH2OSQ8N7S6 290 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 FNDC9Q8TBE3 224 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 SF3B5Q9BWJ5 86 aaKnown RBP19.67■□□□□ 0.74
PSPC1-204ENST00000492741 ASF1BQ9NVP2 202 aa19.67■□□□□ 0.74
PSPC1-204ENST00000492741 H2AFY2Q9P0M6 372 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-204ENST00000492741 LOC102725191A0A1B0GVB3 256 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 CLCA1A8K7I4 914 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 ARHGEF9O43307 516 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 TXNDC12O95881 172 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 IGHMP01871 453 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 SNRPGP62308 76 aaKnown RBP19.66■□□□□ 0.74
PSPC1-204ENST00000492741 SLC17A1Q14916 467 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 PRR30Q53SZ7 412 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-204ENST00000492741 LEG1Q6P5S2 330 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 PLXDC2Q6UX71 529 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 CYB561A3Q8NBI2 242 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 OR9K2Q8NGE7 335 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 TXNDC15Q96J42 360 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 LRR1Q96L50 414 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 NMNAT3Q96T66 252 aa19.66■□□□□ 0.74
PSPC1-204ENST00000492741 FAM183AA6NL82 134 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 PRR23D1E9PI22 279 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CYTIPO60759 359 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 PRR23D2P0DMB1 279 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 FMO3P31513 532 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 BIDP55957 195 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CRMP1Q14194 572 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ZNF585AQ6P3V2 769 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CXXC5Q7LFL8 322 aaKnown RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CPOQ8IVL8 374 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 MCEMP1Q8IX19 187 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 FAM26EQ8N5C1 309 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 SLC37A3Q8NCC5 494 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 Q96MT0 163 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 EMC6Q9BV81 110 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 DNAJC27Q9NZQ0 273 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ACACBO00763 2458 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 A6NIZ1 184 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ZNF726A6NNF4 738 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CDKN2AP42771 156 aaKnown RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CLDN17P56750 224 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 RAP1BP61224 184 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 RAP1AP62834 184 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 EFNB1P98172 346 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ITGADQ13349 1161 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 POU4F3Q15319 338 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 C6orf141Q5SZD1 244 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ZNF362Q5T0B9 420 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 PLBD1Q6P4A8 553 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 CREB3L2Q70SY1 520 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 P4HA3Q7Z4N8 544 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 BCDIN3DQ7Z5W3 292 aaKnown RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ZPLD1Q8TCW7 415 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ABHD3Q8WU67 409 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ASB10Q8WXI3 467 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 ZNF775Q96BV0 537 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-204ENST00000492741 TRIB1Q96RU8 372 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 FN3KQ9H479 309 aa19.65■□□□□ 0.74
PSPC1-204ENST00000492741 TPRP12270 2363 aaKnown RBP19.64■□□□□ 0.73
PSPC1-204ENST00000492741 NPIPB13A6NJU9 1138 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 SLC22A20A6NK97 555 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 NPIPB4C9JG80 1138 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 TRAF3IP2O43734 574 aaPredicted RBP19.64■□□□□ 0.73
PSPC1-204ENST00000492741 SMNDC1O75940 238 aaKnown RBP eCLIP19.64■□□□□ 0.73
PSPC1-204ENST00000492741 RENP00797 406 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 TPOP07202 933 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 ABOP16442 354 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 GABRB1P18505 474 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 MESTQ5EB52 335 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 GTF2IRD2BQ6EKJ0 949 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 ABLIM2Q6H8Q1 611 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 HDDC2Q7Z4H3 204 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 GTF2IRD2Q86UP8 949 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 BPIFB6Q8NFQ5 453 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 ZNF519Q8TB69 540 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 FBLIM1Q8WUP2 373 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 APH1BQ8WW43 257 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 MED20Q9H944 212 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 HINT3Q9NQE9 182 aaKnown RBP19.64■□□□□ 0.73
PSPC1-204ENST00000492741 KLHL9Q9P2J3 617 aa19.64■□□□□ 0.73
PSPC1-204ENST00000492741 SLC35F4A4IF30 521 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms