RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 HIPK4Q8NE63 616 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 PIK3C3Q8NEB9 887 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 GPR32P1Q8NGA4 272 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ANKRD27Q96NW4 1050 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 MOGAT1Q96PD6 335 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SORCS2Q96PQ0 1159 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF607Q96SK3 696 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 EPYCQ99645 322 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ARHGDIGQ99819 225 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 REPIN1Q9BWE0 567 aaKnown RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 RABEP2Q9H5N1 569 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 KAT8Q9H7Z6 458 aaKnown RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 SEC61A2Q9H9S3 476 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 CACYBPQ9HB71 228 aaKnown RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 CRLF2Q9HC73 371 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 MRPL39Q9NYK5 338 aaKnown RBP7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF224Q9NZL3 707 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 RPS6KB2Q9UBS0 482 aa7.26□□□□□ -1.25
SMARCB1-207ENST00000491967 A0A096LPE4 126 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 IGHV2OR16-5A0A0B4J2B6 119 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 A0A1W2PPZ6 126 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 EVPLLA8MZ36 301 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 MT-ATP6P00846 226 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 THY1P04216 161 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CELA3BP08861 270 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 FAM157CP0CG43 387 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF35P13682 527 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 NR4A1P22736 598 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 NR4A2P43354 598 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 EVX1P49640 407 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CRYBA2P53672 197 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CDH12P55289 794 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 LSM11P83369 360 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 ZP4Q12836 540 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 NPTX1Q15818 432 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 DUSP7Q16829 419 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CHRFAM7AQ494W8 412 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 METTL21CQ5VZV1 264 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CYB5R2Q6BCY4 276 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 TSPYL5Q86VY4 417 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 ARMC8Q8IUR7 673 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 C11orf65Q8NCR3 313 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CKAP2Q8WWK9 683 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 FBXO17Q96EF6 278 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 C1orf159Q96HA4 380 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 FOXN4Q96NZ1 517 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CGREF1Q99674 301 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 DENND2DQ9H6A0 471 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 TMEM27Q9HBJ8 222 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 LEF1Q9UJU2 399 aaPredicted RBP7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CDC42EP3Q9UKI2 254 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 NOX1Q9Y5S8 564 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 CUBNO60494 3623 aa7.25□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC35F4A4IF30 521 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 HMGB1P1B2RPK0 211 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 M0QX08 132 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 AKAP8O43823 692 aaKnown RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 IGF2P01344 180 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 IFNA2P01563 188 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TSPAN19P0C672 248 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 ZNF14P17017 642 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 CD247P20963 164 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 THBS4P35443 961 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 PDLIM4P50479 330 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 IDH3GP51553 393 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 RGS8P57771 180 aaPredicted RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 SNRPD2P62316 118 aaKnown RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TUBA1BP68363 451 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TUBA4AP68366 448 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 PUDPQ08623 228 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 PMS2P3Q13401 168 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 C1DQ13901 141 aaKnown RBP7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 SELPLGQ14242 412 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 FXNQ16595 210 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 MSMPQ1L6U9 139 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 LRFN4Q6PJG9 635 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 WDR88Q6ZMY6 472 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TUBA1AQ71U36 451 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 CCDC80Q76M96 950 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 MDP1Q86V88 176 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC30A8Q8IWU4 369 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 UEVLDQ8IX04 471 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 GPR137CQ8N3F9 429 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 OR4D11Q8NGI4 311 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 OR6T1Q8NGN1 323 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 OR6X1Q8NH79 312 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TMEM54Q969K7 222 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TXNDC15Q96J42 360 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 MAGEB18Q96M61 343 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 SEPHS2Q99611 448 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 SIKE1Q9BRV8 207 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 SLC19A3Q9BZV2 496 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 VIPAS39Q9H9C1 493 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 TAS2R5Q9NYW4 299 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 USP22Q9UPT9 525 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 ANGPT4Q9Y264 503 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 NDUFAF1Q9Y375 327 aa7.24□□□□□ -1.25
SMARCB1-207ENST00000491967 IGHV4-61A0A0C4DH41 118 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 M0R3G1 203 aa7.23□□□□□ -1.25
SMARCB1-207ENST00000491967 FBP2O00757 339 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms