RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TRAPPC13A5PLN9 417 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 RNF223E7ERA6 249 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 KRT34O76011 436 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 MT-ATP6P00846 226 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 PAX7P23759 505 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 PCDHAC1Q9H158 963 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 MED29Q9NX70 200 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 SLC7A7Q9UM01 511 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 USP22Q9UPT9 525 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 NOX1Q9Y5S8 564 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 CAPN7Q9Y6W3 813 aa27.34■■□□□ 1.97
LDB1-204ENST00000490751 M0R3G1 203 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 PLPP3O14495 311 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 HOXB1P14653 301 aaPredicted RBP27.33■■□□□ 1.97
LDB1-204ENST00000490751 AHCYP23526 432 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 PHYHD1Q5SRE7 291 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 TTC33Q6PID6 262 aaPredicted RBP27.33■■□□□ 1.97
LDB1-204ENST00000490751 DNM1P46Q6ZS02 220 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 PCYOX1LQ8NBM8 494 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 OR5J2Q8NH18 312 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 TXNDC15Q96J42 360 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 KCNS3Q9BQ31 491 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 CRNNQ9UBG3 495 aaPredicted RBP27.33■■□□□ 1.97
LDB1-204ENST00000490751 ZANQ9Y493 2812 aa27.33■■□□□ 1.97
LDB1-204ENST00000490751 SLC35F4A4IF30 521 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 SERPINI2O75830 405 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 APOBEC3AP31941 199 aaPredicted RBP27.32■■□□□ 1.96
LDB1-204ENST00000490751 ERICH5Q6P6B1 374 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 NHLRC1Q6VVB1 395 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 PXKQ7Z7A4 578 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 C20orf196Q8IYI0 205 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 MAPK1IP1LQ8NDC0 245 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 PROX1Q92786 737 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 ZNF583Q96ND8 569 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 KATNB1Q9BVA0 655 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 GID8Q9NWU2 228 aa27.32■■□□□ 1.96
LDB1-204ENST00000490751 KPNA4O00629 521 aaPredicted RBP27.31■■□□□ 1.96
LDB1-204ENST00000490751 SSX4O60224 188 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 SEC14L2O76054 403 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 ADORA3P0DMS8 318 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 NUDT6P53370 316 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 ZNF74Q16587 644 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 CARM1Q86X55 608 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 MPP4Q96JB8 637 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 REG4Q9BYZ8 158 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 MOV10Q9HCE1 1003 aaKnown RBP27.31■■□□□ 1.96
LDB1-204ENST00000490751 SH3GLB1Q9Y371 365 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 FN1P02751 2386 aaKnown RBP27.31■■□□□ 1.96
LDB1-204ENST00000490751 TLN2Q9Y4G6 2542 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 CR1P17927 2039 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 ALPK2Q86TB3 2170 aa27.31■■□□□ 1.96
LDB1-204ENST00000490751 CSPG4Q6UVK1 2322 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 NAV3Q8IVL0 2385 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 ZNF99A8MXY4 864 aaPredicted RBP27.3■■□□□ 1.96
LDB1-204ENST00000490751 C11orf98E9PRG8 122 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 CH25HO95992 272 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 IGLV1-44P01699 117 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 CRYAAP02489 173 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 CECR9P0C854 216 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 TNFRSF1BP20333 461 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 NAAAQ02083 359 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 C3orf36Q3SXR2 165 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 WDFY1Q8IWB7 410 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 C10orf82Q8WW14 230 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 HTRA1Q92743 480 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 LRR1Q96L50 414 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 ZNF426Q9BUY5 554 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 SEC61A2Q9H9S3 476 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 MED4Q9NPJ6 270 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 ARMCX1Q9P291 453 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 BAG5Q9UL15 447 aa27.3■■□□□ 1.96
LDB1-204ENST00000490751 ZNF726A6NNF4 738 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 OR6A2O95222 327 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 CHRNB3Q05901 458 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 CAMK2DQ13557 499 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 RAB35Q15286 201 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 FAM169BQ8N8A8 192 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 PRSS27Q9BQR3 290 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 B3GAT2Q9NPZ5 323 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 NANSQ9NR45 359 aa27.29■■□□□ 1.96
LDB1-204ENST00000490751 H7C417 338 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 SLC22A2O15244 555 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 IGKV3-15P01624 115 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 MDH1P40925 334 aaKnown RBP27.28■■□□□ 1.96
LDB1-204ENST00000490751 POU5F2Q8N7G0 328 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 OR6N1Q8NGY5 312 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 RCN3Q96D15 328 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 SLC19A3Q9BZV2 496 aa27.28■■□□□ 1.96
LDB1-204ENST00000490751 ZNF503-AS2A6NEH8 195 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 FAM220BPB1ANY3 271 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 CELA3BP08861 270 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 BMP4P12644 408 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 CBR1P16152 277 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 PCSK6P29122 969 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 CAPZA2P47755 286 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 DEF8Q6ZN54 512 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 MYPOPQ86VE0 399 aaPredicted RBP27.27■■□□□ 1.96
LDB1-204ENST00000490751 FBXO17Q96EF6 278 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 ULBP2Q9BZM5 246 aa27.27■■□□□ 1.96
LDB1-204ENST00000490751 SHOX2O60902 331 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms