RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 GSTT2BP0CG30 244 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 CD36P16671 472 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PRPS1L1P21108 318 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 S100A1P23297 94 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PSMB9P28065 219 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PTPN6P29350 595 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 TGFBR2P37173 567 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 FEN1P39748 380 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MAP2K4P45985 399 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 GSSP48637 474 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 GPR143P51810 404 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PSMD4P55036 377 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MLF1P58340 268 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 VBP1P61758 197 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 DCAF7P61962 342 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 HMGCS1Q01581 520 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PLGLB1Q02325 96 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ID2Q02363 134 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PRKCDQ05655 676 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 Q0VFX4 171 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SELENBP1Q13228 472 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PTGR1Q14914 329 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 TBCEQ15813 527 aaPredicted RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 KCNJ8Q15842 424 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MPEG1Q2M385 716 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF750Q32MQ0 723 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF404Q494X3 552 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 GTDC1Q4AE62 458 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 KRTCAP3Q53RY4 240 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 C1QTNF12Q5T7M4 302 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 TMEM236Q5W0B7 351 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 C18orf63Q68DL7 685 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SLC25A25Q6KCM7 469 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 NOXRED1Q6NXP6 359 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 H3F3CQ6NXT2 135 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 RPUSD3Q6P087 351 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MTFR2Q6P444 385 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 FAHD1Q6P587 224 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 BHLHB9Q6PI77 547 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 RTL4Q6ZR62 310 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PTCHD4Q6ZW05 846 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 USP43Q70EL4 1123 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 EIF3MQ7L2H7 374 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SZRD1Q7Z422 152 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 GALNT5Q7Z7M9 940 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SLC22A16Q86VW1 577 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 OR4N5Q8IXE1 308 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 BEST3Q8N1M1 668 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 RNF175Q8N4F7 328 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 KRTCAP2Q8N6L1 136 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 RBMXL3Q8N7X1 1067 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF540Q8NDQ6 660 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MCFD2Q8NI22 146 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 NUBPLQ8TB37 319 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 C16orf78Q8WTQ4 265 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PTPMT1Q8WUK0 201 aaPredicted RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MYDGFQ969H8 173 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 EXOSC8Q96B26 276 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ANKRD9Q96BM1 317 aaPredicted RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 TM4SF18Q96CE8 201 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 LGALS12Q96DT0 336 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MTERF3Q96E29 417 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ZHX1-C8orf76Q96EF9 292 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ZBED6CLQ96FA7 236 aaPredicted RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SNX22Q96L94 193 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 FCRL1Q96LA6 429 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 EPYCQ99645 322 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SLX1AQ9BQ83 275 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ITPAQ9BY32 194 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 GABARAPL3Q9BY60 117 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 NXF2Q9GZY0 626 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 DCSTAMPQ9H295 470 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MOV10Q9HCE1 1003 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MYNNQ9NPC7 610 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 SLC35C2Q9NQQ7 365 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 KLHL1Q9NR64 748 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PLCXD1Q9NUJ7 323 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 EXD2Q9NVH0 621 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 FKBP14Q9NWM8 211 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 TEX10Q9NXF1 929 aaPredicted RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 CNIH4Q9P003 139 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 MGAT4CQ9UBM8 478 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF229Q9UJW7 825 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 BOKQ9UMX3 212 aaPredicted RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 PPIEQ9UNP9 301 aaKnown RBP4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ERVK-19Q9WJR5 959 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 OR10H1Q9Y4A9 318 aa4.26□□□□□ -1.73
CSTF1-205ENST00000490539 ANKUB1A6NFN9 424 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 AGAP5A6NIR3 686 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 MYO1GB0I1T2 1018 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 C4orf51C9J302 202 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 K7EM74 188 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 CLIC1O00299 241 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 WWP2O00308 870 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 RFXANKO14593 260 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 PGRMC2O15173 223 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 DNAJB6O75190 326 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 WBP4O75554 376 aaKnown RBP4.25□□□□□ -1.73
CSTF1-205ENST00000490539 SNX4O95219 450 aa4.25□□□□□ -1.73
CSTF1-205ENST00000490539 OXSR1O95747 527 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms