RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SLC17A7Q9P2U7 560 aa2.65□□□□□ -1.98
DEPDC1-204ENST00000489862 PEX16Q9Y5Y5 336 aa2.65□□□□□ -1.98
DEPDC1-204ENST00000489862 MAD1L1Q9Y6D9 718 aa2.65□□□□□ -1.98
DEPDC1-204ENST00000489862 CHD4Q14839 1912 aa2.65□□□□□ -1.99
DEPDC1-204ENST00000489862 CCDC88AQ3V6T2 1871 aa2.65□□□□□ -1.99
DEPDC1-204ENST00000489862 GREB1LQ9C091 1923 aaPredicted RBP2.65□□□□□ -1.99
DEPDC1-204ENST00000489862 KBTBD11-OT1A0A1B0GTJ5 212 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1W2PPI3 338 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1W2PR80 420 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TMEM120BA0PK00 339 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RAB19A4D1S5 217 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TUBAL3A6NHL2 446 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CYB561D2O14569 222 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RFXANKO14593 260 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HSD17B6O14756 317 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ATP6V0E1O15342 81 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FGF17O60258 216 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZG16O60844 167 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 SC5DO75845 299 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CD160O95971 181 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HPP00738 406 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 IGHG4P01861 327 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 IFNW1P05000 195 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 STSP08842 583 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HOXD4P09016 255 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 UBTFL1P0CB47 393 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PNMA6AP0CW24 399 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NEFHP12036 1026 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF24P17028 368 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PMCHP20382 165 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NPR2P20594 1047 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 IMPDH1P20839 514 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CCNOP22674 350 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ANOS1P23352 680 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PSMB6P28072 239 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 S100A5P33763 92 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 GYG1P46976 350 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NOVP48745 357 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 KCNJ2P63252 427 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MRPS15P82914 257 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RAD51Q06609 339 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TMEM187Q14656 261 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 KIR2DS3Q14952 304 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 P2RY6Q15077 328 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TNXAQ16473 311 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MOGAT2Q3SYC2 334 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 VPS26BQ4G0F5 336 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 SIRPB2Q5JXA9 342 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FFAR4Q5NUL3 377 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OR2G6Q5TZ20 316 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 KMT5CQ86Y97 462 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 BOD1L2Q8IYS8 172 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MARVELD2Q8N4S9 558 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF248Q8NDW4 579 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 SETD7Q8WTS6 366 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CAPSLQ8WWF8 208 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HTR3CQ8WXA8 447 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FRAT1Q92837 279 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NAT6Q93015 286 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FBXO17Q96EF6 278 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OXGR1Q96P68 337 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 IL12RB2Q99665 862 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RHNO1Q9BSD3 238 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PAPOLGQ9BWT3 736 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MAP1LC3CQ9BXW4 147 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NSRP1Q9H0G5 558 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OR52A5Q9H2C5 316 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 FGF20Q9NP95 211 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 INTS9Q9NV88 658 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF446Q9NWS9 450 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TAS2R16Q9NYV7 291 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NUDT4Q9NZJ9 180 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CLN8Q9UBY8 286 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CYTH4Q9UIA0 394 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 SCN9AQ15858 1988 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RTL9Q8NET4 1388 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 LRRC37AA6NMS7 1700 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 ZNF646O15015 1829 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NSG1A0A0A6YYJ2 146 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 A0A1W2PQ72 361 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 OR6C65A6NJZ3 312 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 M0QXV9 152 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TFECO14948 347 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 PSTPIP1O43586 416 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 AMBPP02760 352 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 WNT2P09544 360 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 H2BFMP0C1H6 154 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HSMCR30P0CW71 290 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 MGMTP16455 207 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RPL35AP18077 110 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 AADACP22760 399 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CD40LGP29965 261 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 HOXA6P31267 233 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 RRM2P31350 389 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CEACAM3P40198 252 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 NSG1P42857 185 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 GSSP48637 474 aa2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 CDC34P49427 236 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 TMED10P49755 219 aaKnown RBP2.64□□□□□ -1.99
DEPDC1-204ENST00000489862 LINC01547P58512 204 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms