RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TMEM80Q96HE8 168 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 NMNAT2Q9BZQ4 307 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 SLC6A15Q9H2J7 730 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 AKAP13Q12802 2813 aa19.39■□□□□ 0.7
SMC4-221ENST00000489573 OR6C68A6NDL8 312 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 CCDC182A6NF36 153 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 A6NHS1 94 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 NPIPA5E9PKD4 350 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 EIF1AYO14602 144 aaKnown RBP19.39■□□□□ 0.69
SMC4-221ENST00000489573 XKRYO14609 159 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 SEC14L5O43304 696 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 DNPH1O43598 174 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 CLUP10909 449 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 RPS7P62081 194 aaKnown RBP19.39■□□□□ 0.69
SMC4-221ENST00000489573 HSF1Q00613 529 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 POU3F1Q03052 451 aaPredicted RBP19.39■□□□□ 0.69
SMC4-221ENST00000489573 EMX1Q04741 257 aaPredicted RBP19.39■□□□□ 0.69
SMC4-221ENST00000489573 SATL1Q86VE3 508 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 GHDCQ8N2G8 530 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 OR52I1Q8NGK6 324 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 KISS1RQ969F8 398 aaPredicted RBP19.39■□□□□ 0.69
SMC4-221ENST00000489573 ZHX1-C8orf76Q96EF9 292 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 NAA11Q9BSU3 229 aaPredicted RBP19.39■□□□□ 0.69
SMC4-221ENST00000489573 ACKR4Q9NPB9 350 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 B3GAT1Q9P2W7 334 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 NPIPA1Q9UND3 350 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 COMMD3-BMI1R4GMX3 469 aa19.39■□□□□ 0.69
SMC4-221ENST00000489573 ZNF814B7Z6K7 855 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 RAB36O95755 333 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 RENP00797 406 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 MAP2K4P45985 399 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 SLC25A1P53007 311 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 SLC16A1P53985 500 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 UCNP55089 124 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 H3F3AP84243 136 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 LGALS3BPQ08380 585 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 SLC10A1Q14973 349 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 FAM205BPQ63HN1 556 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 HBMQ6B0K9 141 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 SLC35D2Q76EJ3 337 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 UEVLDQ8IX04 471 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 UBQLNLQ8IYU4 475 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 OR2V1Q8NHB1 315 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 C9orf43Q8TAL5 461 aaPredicted RBP19.38■□□□□ 0.69
SMC4-221ENST00000489573 ADGRG7Q96K78 797 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 CNTNAP3BQ96NU0 1288 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 SNX18Q96RF0 628 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 CDCA4Q9BXL8 241 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 CNTNAP3Q9BZ76 1288 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 FGF20Q9NP95 211 aaPredicted RBP19.38■□□□□ 0.69
SMC4-221ENST00000489573 DIMT1Q9UNQ2 313 aaKnown RBP19.38■□□□□ 0.69
SMC4-221ENST00000489573 RASD1Q9Y272 281 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 NOX1Q9Y5S8 564 aa19.38■□□□□ 0.69
SMC4-221ENST00000489573 A6NIZ1 184 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 H0YC42 278 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 MKRN2OSH3BPM6 223 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 ARHGEF9O43307 516 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 BCL10O95999 233 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 GYPBP06028 91 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 ADRA2AP08913 450 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 IFNGR1P15260 489 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 TMPRSS3P57727 454 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 RAC3P60763 192 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 RAP1BP61224 184 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 RAP1AP62834 184 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 PMP22Q01453 160 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 IRF3Q14653 427 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 MELKQ14680 651 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 TBCEQ15813 527 aaPredicted RBP19.37■□□□□ 0.69
SMC4-221ENST00000489573 LCN1P1Q5VSP4 162 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 TMEM225Q6GV28 225 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 TRILQ7L0X0 811 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 ASB10Q8WXI3 467 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 OXGR1Q96P68 337 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 TEAD3Q99594 435 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 SRXN1Q9BYN0 137 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 ZDHHC11Q9H8X9 412 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 ACOT13Q9NPJ3 140 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 RPRD1BQ9NQG5 326 aaKnown RBP19.37■□□□□ 0.69
SMC4-221ENST00000489573 EXOGQ9Y2C4 368 aaKnown RBP19.37■□□□□ 0.69
SMC4-221ENST00000489573 RAXQ9Y2V3 346 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 ASPMQ8IZT6 3477 aa19.37■□□□□ 0.69
SMC4-221ENST00000489573 LOC102725191A0A1B0GVB3 256 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 H7C1C5 153 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 APOL3O95236 402 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 SPI1P17947 270 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 KLK2P20151 261 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 DCKP27707 260 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 LHX2P50458 406 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 AGFG1P52594 562 aaKnown RBP19.36■□□□□ 0.69
SMC4-221ENST00000489573 SUCLG1P53597 346 aaKnown RBP19.36■□□□□ 0.69
SMC4-221ENST00000489573 LCN6P62502 163 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 DBPQ10586 325 aaPredicted RBP19.36■□□□□ 0.69
SMC4-221ENST00000489573 ZNF169Q14929 603 aaPredicted RBP19.36■□□□□ 0.69
SMC4-221ENST00000489573 RNFT1Q5M7Z0 435 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 SLC35D3Q5M8T2 416 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 PDSS1Q5T2R2 415 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 ASB18Q6ZVZ8 466 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 FAR1Q8WVX9 515 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 MUL1Q969V5 352 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms