RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 RNPS1Q15287 305 aaKnown RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MS4A18Q3C1V0 323 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 ALG10Q5BKT4 473 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 RPL13AP3Q6NVV1 102 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 SEM1Q6ZVN7 128 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 NCCRP1Q6ZVX7 275 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 OR52L1Q8NGH7 329 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MBD3L2Q8NHZ7 208 aaPredicted RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 TFAP2CQ92754 450 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 INTS12Q96CB8 462 aaKnown RBP12.69□□□□□ -0.38
CLDN11-209ENST00000489485 VKORC1Q9BQB6 163 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 IFT27Q9BW83 186 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MEMO1Q9Y316 297 aa12.69□□□□□ -0.38
CLDN11-209ENST00000489485 MCIDASD6RGH6 385 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 GNAO1P09471 354 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 TSPAN19P0C672 248 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 GLI4P10075 376 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 HSPA13P48723 471 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 POU3F1Q03052 451 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-209ENST00000489485 C1DQ13901 141 aaKnown RBP12.68□□□□□ -0.38
CLDN11-209ENST00000489485 GINS1Q14691 196 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 SLC17A1Q14916 467 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ANKDD1AQ495B1 522 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ABLIM2Q6H8Q1 611 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 OR2A2Q6IF42 318 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ADPRHL1Q8NDY3 354 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 NR1H4Q96RI1 486 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-209ENST00000489485 MAGEA13PA6NCF6 341 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ZNF716A6NP11 495 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 PYCARD-AS1I3L0S3 204 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 LRRTM2O43300 516 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 TOXO94900 526 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 HLA-DOBP13765 273 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 PAX7P23759 505 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 TIMP3P35625 211 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ADARB1P78563 741 aaKnown RBP12.68□□□□□ -0.38
CLDN11-209ENST00000489485 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ACSM5Q6NUN0 579 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 SLC27A4Q6P1M0 643 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 PXKQ7Z7A4 578 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 UEVLDQ8IX04 471 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 TUSC5Q8IXB3 177 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 MARVELD2Q8N4S9 558 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 OR2T33Q8NG76 320 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 OR9K2Q8NGE7 335 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 KATNB1Q9BVA0 655 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 SF3B5Q9BWJ5 86 aaKnown RBP12.68□□□□□ -0.38
CLDN11-209ENST00000489485 B3GAT1Q9P2W7 334 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 ADAM18Q9Y3Q7 739 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
CLDN11-209ENST00000489485 A0A1W2PNV4 684 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 SLC16A6O15403 523 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 PPP1R3DO95685 299 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 YES1P07947 543 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 SLC6A6P31641 620 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 CAPGP40121 348 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 CTXN1P60606 82 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 CDK5Q00535 292 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 TMEM201Q5SNT2 666 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 TMEM211Q6ICI0 200 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 TMEM154Q6P9G4 183 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 CNEP1R1Q8N9A8 125 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 OR4Q3Q8NH05 313 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 GMPPAQ96IJ6 420 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-209ENST00000489485 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 GLRX2Q9NS18 164 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 EMC3Q9P0I2 261 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
CLDN11-209ENST00000489485 RAB26Q9ULW5 256 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 NOX1Q9Y5S8 564 aa12.67□□□□□ -0.38
CLDN11-209ENST00000489485 A0A1B0GUH1 482 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 H0YAE9 185 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 BHLHE40O14503 412 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 GPR171O14626 319 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 TMIGD3P0DMS9 266 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-209ENST00000489485 NOS3P29474 1203 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 SMSP52788 366 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 SLC16A1P53985 500 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 ERVK-25P63136 954 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 SIRPAP78324 504 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 MYBPC1Q00872 1141 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 ZP4Q12836 540 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 FOXF2Q12947 444 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 POU4F3Q15319 338 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 SLC35F1Q5T1Q4 408 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 DPY19L2P2Q6ZN68 376 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 CREB3L2Q70SY1 520 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 LRRC75AQ8NAA5 344 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 NAXEQ8NCW5 288 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 RND1Q92730 232 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 MUS81Q96NY9 551 aa12.66□□□□□ -0.38
CLDN11-209ENST00000489485 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms