RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SELENOTP62341 195 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 ILKQ13418 452 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 C1orf100Q5SVJ3 147 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 TMIGD1Q6UXZ0 262 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 OTUD6AQ7L8S5 288 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 KIR2DL5AQ8N109 375 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 CD177Q8N6Q3 437 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 NKAPP1Q8N9T2 125 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 KIR2DL5BQ8NHK3 375 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 FGF14Q92915 247 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 HSFY1Q96LI6 401 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 TSG101Q99816 390 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 ARHGDIGQ99819 225 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 SH3GL1Q99961 368 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 EBF4Q9BQW3 602 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 PELOQ9BRX2 385 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 ZDHHC11Q9H8X9 412 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 ADAP2Q9NPF8 381 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 MARCH5Q9NX47 278 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 KCNIP1Q9NZI2 227 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 CD274Q9NZQ7 290 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 PDP1Q9P0J1 537 aaPredicted RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 PLEKHG2Q9H7P9 1386 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 IGLV3-10A0A075B6K4 115 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 TRAV25A0A0B4J276 109 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 KLF18A0A0U1RQI7 1052 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 A0A1B0GTQ1 180 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 SUPT3HB4E1H0 165 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 TEX46H3BTG2 121 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 AKR7A2O43488 359 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 SOX15O60248 233 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 SNAPINO95295 136 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 HSPB1P04792 205 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 PSMB1P20618 241 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 SLC2A5P22732 501 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 NAA10P41227 235 aaPredicted RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 GLP1RP43220 463 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 NAMPTP43490 491 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 RPS5P46782 204 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 RGRP47804 291 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 NPBWR2P48146 333 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 TFPI2P48307 235 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 CSNK1EP49674 416 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 CCNHP51946 323 aaPredicted RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 RIPPLY3P57055 190 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 ERVK-25P63136 954 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 ZNF45Q02386 682 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 SPAG1Q07617 926 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 PDIA2Q13087 525 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 CAVIN4Q5BKX8 364 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 ZBED8Q8IZ13 594 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 PRR22Q8IZ63 422 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 PUSL1Q8N0Z8 303 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 CEND1Q8N111 149 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 GABRG1Q8N1C3 465 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 PQLC3Q8N755 202 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 FBXL13Q8NEE6 735 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 OR2AP1Q8NGE2 309 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 OR51S1Q8NGJ8 323 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 OR4A4PQ8NGN8 299 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 OR2G2Q8NGZ5 317 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 SMIM14Q96QK8 99 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 SLC29A1Q99808 456 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 BCL7BQ9BQE9 202 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 CWH43Q9H720 699 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 FGF20Q9NP95 211 aaPredicted RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 AIG1Q9NVV5 245 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 TMEM9Q9P0T7 183 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 BTNL2Q9UIR0 455 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 LSM7Q9UK45 103 aaKnown RBP3.12□□□□□ -1.91
XRN1-213ENST00000489241 TBC1D24Q9ULP9 559 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 CLEC4EQ9ULY5 219 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 FANCIQ9NVI1 1328 aa3.12□□□□□ -1.91
XRN1-213ENST00000489241 A0A0G2JLM5 398 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 SMCO2A6NFE2 343 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 SPECC1L-ADORA2AF8WAN1 911 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 PPP1R2P9O14990 202 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 CHST1O43916 411 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 FGGP02679 453 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 RALBP11234 206 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 CCNB1P14635 433 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 GTF2E2P29084 291 aaKnown RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 RRM2P31350 389 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 MAGEA1P43355 309 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 VDAC2P45880 294 aaPredicted RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 ARRB1P49407 418 aaPredicted RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 TMED10P49755 219 aaKnown RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 DLX1P56177 255 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 RAB10P61026 200 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 ACVR1Q04771 509 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 LIPEQ05469 1076 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 SELENBP1Q13228 472 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 ATP6AP1Q15904 470 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 HADHQ16836 314 aaKnown RBP3.11□□□□□ -1.91
XRN1-213ENST00000489241 PIP5KL1Q5T9C9 394 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 C9orf135Q5VTT2 229 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 C22orf42Q6IC83 251 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 REEP3Q6NUK4 255 aa3.11□□□□□ -1.91
XRN1-213ENST00000489241 CCDC73Q6ZRK6 1079 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms