RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 INTS11Q5TA45 600 aaKnown RBP12.21□□□□□ -0.45
VTI1A-206ENST00000489142 LINC00114Q6XXX2 140 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 CARM1Q86X55 608 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 SLC30A8Q8IWU4 369 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 LRRC17Q8N6Y2 441 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 SCAIQ8N9R8 606 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 MRPL39Q9NYK5 338 aaKnown RBP12.21□□□□□ -0.45
VTI1A-206ENST00000489142 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 CORINQ9Y5Q5 1042 aa12.21□□□□□ -0.45
VTI1A-206ENST00000489142 ARFGEF3Q5TH69 2177 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 ARPC4-TTLL3A0A0A6YYG9 625 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 SLC35F4A4IF30 521 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 TRAPPC13A5PLN9 417 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 BBIP1A8MTZ0 92 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 INAFM1C9JVW0 142 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 AKAP8O43823 692 aaKnown RBP12.2□□□□□ -0.46
VTI1A-206ENST00000489142 LY6HO94772 140 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 ADORA3P0DMS8 318 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 CALCRP30988 508 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 CAPZA2P47755 286 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 OR1E2P47887 323 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 IDH3GP51553 393 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-206ENST00000489142 NUDT6P53370 316 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 KRTAP1-1Q07627 177 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 NPRL3Q12980 569 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 MAPRE2Q15555 327 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF74Q16587 644 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 LRRC23Q53EV4 343 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-206ENST00000489142 HSP90B2PQ58FF3 399 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 TTC33Q6PID6 262 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-206ENST00000489142 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 DEF8Q6ZN54 512 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 CCDC80Q76M96 950 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 PIK3C3Q8NEB9 887 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 OR8J3Q8NGG0 315 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 OR5J2Q8NH18 312 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 OR6S1Q8NH40 331 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 C10orf82Q8WW14 230 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 RCN3Q96D15 328 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 FBXO17Q96EF6 278 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 BOD1Q96IK1 185 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 ADAD1Q96M93 576 aaKnown RBP12.2□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF583Q96ND8 569 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 KCNS3Q9BQ31 491 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 REG4Q9BYZ8 158 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 EVA1AQ9H8M9 152 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 OBP2BQ9NPH6 170 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 CAPN7Q9Y6W3 813 aa12.2□□□□□ -0.46
VTI1A-206ENST00000489142 IGHV4-30-2A0A087WSY4 118 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 LOC102725191A0A1B0GVB3 256 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 RPL36A-HNRNPH2H7BZ11 118 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 UMPSP11172 480 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 IFNGR1P15260 489 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-206ENST00000489142 SH3BGRP55822 239 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-206ENST00000489142 BIDP55957 195 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 NAAAQ02083 359 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 MELKQ14680 651 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 ETFDHQ16134 617 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 COQ5Q5HYK3 327 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF544Q6NX49 715 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 NHLRC1Q6VVB1 395 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 DNM1P46Q6ZS02 220 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 MDP1Q86V88 176 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 C20orf196Q8IYI0 205 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF525Q8N782 197 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 PROX1Q92786 737 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 SH3GL1Q99961 368 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 PRSS27Q9BQR3 290 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 GRIP2Q9C0E4 1043 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 NOX3Q9HBY0 568 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 NOX1Q9Y5S8 564 aa12.19□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF726A6NNF4 738 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 ZNF99A8MXY4 864 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-206ENST00000489142 OR6A2O95222 327 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 MT-ATP6P00846 226 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 HLA-HP01893 362 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 CRYAAP02489 173 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 B4GALT1P15291 398 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
VTI1A-206ENST00000489142 UGT2B15P54855 530 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 PIGFQ07326 219 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 RAB35Q15286 201 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 PXKQ7Z7A4 578 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 NKAIN4Q8IVV8 208 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 OR6N1Q8NGY5 312 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 MAGEE2Q8TD90 523 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-206ENST00000489142 TMEM255BQ8WV15 326 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 TPD52L3Q96J77 140 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 KATNB1Q9BVA0 655 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 ULBP2Q9BZM5 246 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 PCDHAC1Q9H158 963 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
VTI1A-206ENST00000489142 BARX1Q9HBU1 254 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-206ENST00000489142 MEPEQ9NQ76 525 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-206ENST00000489142 NANSQ9NR45 359 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms