RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FBXO17Q96EF6 278 aa20.02■□□□□ 0.8
COL9A3-213ENST00000489045 PMF1-BGLAPU3KQ54 211 aa20.02■□□□□ 0.8
COL9A3-213ENST00000489045 SEC14L2O76054 403 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 IGLV1-44P01699 117 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 THY1P04216 161 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 TROVE2P10155 538 aaKnown RBP eCLIP20.01■□□□□ 0.793e-9■□□□□ 9.6
COL9A3-213ENST00000489045 BMP4P12644 408 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 GZMMP51124 257 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 VMACQ2NL98 169 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 RABL3Q5HYI8 236 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 INTS11Q5TA45 600 aaKnown RBP20.01■□□□□ 0.79
COL9A3-213ENST00000489045 NANOGP8Q6NSW7 305 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 WDR88Q6ZMY6 472 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF525Q8N782 197 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 OR10H5Q8NGA6 315 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 SLC26A7Q8TE54 656 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 TXNDC15Q96J42 360 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 NANOGQ9H9S0 305 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 MOV10Q9HCE1 1003 aaKnown RBP20.01■□□□□ 0.79
COL9A3-213ENST00000489045 FGFR1OP2Q9NVK5 253 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 MED29Q9NX70 200 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 NOX1Q9Y5S8 564 aa20.01■□□□□ 0.79
COL9A3-213ENST00000489045 SLC35F4A4IF30 521 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF503-AS2A6NEH8 195 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF99A8MXY4 864 aaPredicted RBP20■□□□□ 0.79
COL9A3-213ENST00000489045 PLPP3O14495 311 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 LYPD3O95274 346 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 MT-ATP6P00846 226 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 IGKV3-15P01624 115 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 TP53P04637 393 aaPredicted RBP20■□□□□ 0.79
COL9A3-213ENST00000489045 CALCRP30988 508 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 SF3A3Q12874 501 aaKnown RBP eCLIP20■□□□□ 0.797e-7■■■■□ 21.5
COL9A3-213ENST00000489045 CYLC2Q14093 348 aaPredicted RBP20■□□□□ 0.79
COL9A3-213ENST00000489045 SWI5Q1ZZU3 235 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 MST1LQ2TV78 715 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 NHLRC1Q6VVB1 395 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 MYPOPQ86VE0 399 aaPredicted RBP20■□□□□ 0.79
COL9A3-213ENST00000489045 TSPYL5Q86VY4 417 aaPredicted RBP20■□□□□ 0.79
COL9A3-213ENST00000489045 PRIMA1Q86XR5 153 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 WDFY1Q8IWB7 410 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 C20orf196Q8IYI0 205 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 FAM169BQ8N8A8 192 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 ADAMTS16Q8TE57 1224 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 CA10Q9NS85 328 aa20■□□□□ 0.79
COL9A3-213ENST00000489045 YLPM1P49750 1951 aaKnown RBP19.99■□□□□ 0.79
COL9A3-213ENST00000489045 FXYD1O00168 92 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 SERPINI2O75830 405 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 CELA3BP08861 270 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 CBR1P16152 277 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 AHCYP23526 432 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 IDH3GP51553 393 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-213ENST00000489045 ARFIP2P53365 341 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 CRYBA2P53672 197 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 DSCR9P59020 149 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 CGB2Q6NT52 195 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 OR5J2Q8NH18 312 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 SLC7A7Q9UM01 511 aa19.99■□□□□ 0.79
COL9A3-213ENST00000489045 A0A096LNT2 108 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 TRAPPC13A5PLN9 417 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 C11orf98E9PRG8 122 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 ADORA3P0DMS8 318 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 CAPZA2P47755 286 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 EFNA4P52798 201 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 SNRPD2P62316 118 aaKnown RBP19.98■□□□□ 0.79
COL9A3-213ENST00000489045 NPRL3Q12980 569 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 KLF10Q13118 480 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 CAMK2DQ13557 499 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 MMEL1Q495T6 779 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 REP15Q6BDI9 236 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 TTC33Q6PID6 262 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-213ENST00000489045 VHLLQ6RSH7 139 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 CCDC80Q76M96 950 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 PXKQ7Z7A4 578 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 OR8J3Q8NGG0 315 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 RASSF5Q8WWW0 418 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 LRRC58Q96CX6 371 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 LRR1Q96L50 414 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 SH3GL1Q99961 368 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 PCDHAC1Q9H158 963 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 B3GAT2Q9NPZ5 323 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 MRGBPQ9NV56 204 aa19.98■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF726A6NNF4 738 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 KPNA4O00629 521 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-213ENST00000489045 MRASO14807 208 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 CD5LO43866 347 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 LY6HO94772 140 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 SERPINF1P36955 418 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 ZNF74Q16587 644 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 COQ5Q5HYK3 327 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 MDP1Q86V88 176 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 CALHM3Q86XJ0 350 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 OR4F15Q8NGB8 312 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 FAM168AQ92567 244 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 ECSITQ9BQ95 431 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 ULBP2Q9BZM5 246 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 SAR1AQ9NR31 198 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 USP22Q9UPT9 525 aa19.97■□□□□ 0.79
COL9A3-213ENST00000489045 GPRIN2O60269 458 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 CRLF1O75462 422 aa19.96■□□□□ 0.79
COL9A3-213ENST00000489045 OR6A2O95222 327 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms