RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 B3GAT2Q9NPZ5 323 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 NOX1Q9Y5S8 564 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 NIPBLQ6KC79 2804 aaeCLIP12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 CR1P17927 2039 aa12.06□□□□□ -0.48
SPTLC1-207ENST00000488921 NSD1Q96L73 2696 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 IGHV1-18A0A0C4DH31 117 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 TRAPPC13A5PLN9 417 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 CPSF4LA6NMK7 179 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 ATP6V1G2-DDX39BF2Z307 99 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 H7C417 338 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 CD247P20963 164 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 NUDT6P53370 316 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 PPP2R2BQ00005 443 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 TTC33Q6PID6 262 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 PXKQ7Z7A4 578 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 CCDC36Q8IYA8 594 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 FAM169BQ8N8A8 192 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 OR5J2Q8NH18 312 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 PROX1Q92786 737 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 TAMM41Q96BW9 452 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 MPP4Q96JB8 637 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 LRR1Q96L50 414 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 MOGAT1Q96PD6 335 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 SLC19A3Q9BZV2 496 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 PCDHAC1Q9H158 963 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 CRLF2Q9HC73 371 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 GPR35Q9HC97 309 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 SAR1AQ9NR31 198 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 GID8Q9NWU2 228 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 CRNNQ9UBG3 495 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 GDF2Q9UK05 429 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 BAG5Q9UL15 447 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 MOKQ9UQ07 419 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 PMF1-BGLAPU3KQ54 211 aa12.05□□□□□ -0.48
SPTLC1-207ENST00000488921 A0A096LPE4 126 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 ZNF726A6NNF4 738 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 ZNF99A8MXY4 864 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 MS4A18H0YCH9 400 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 FXYD1O00168 92 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 SLC22A2O15244 555 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 DCTN3O75935 186 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 OR6A2O95222 327 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 IFNA14P01570 189 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 PTNP21246 168 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 GZMMP51124 257 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 DSCR9P59020 149 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 ARF1P84077 181 aaKnown RBP12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 RAB35Q15286 201 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 NPTX1Q15818 432 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 CEACAM16Q2WEN9 425 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 MS4A18Q3C1V0 323 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 RABL3Q5HYI8 236 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 LINC00114Q6XXX2 140 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 DNM1P46Q6ZS02 220 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 REG4Q9BYZ8 158 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 POLR2J2Q9GZM3 115 aaKnown RBP12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 CAPN7Q9Y6W3 813 aa12.04□□□□□ -0.48
SPTLC1-207ENST00000488921 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 M0R3G1 203 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 PLPP3O14495 311 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 SSX4O60224 188 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 NDUFS7O75251 213 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 PDE5AO76074 875 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 HPRP00739 348 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 IGKV3-15P01624 115 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 IGLV1-44P01699 117 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 ADORA3P0DMS8 318 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 AHCYP23526 432 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 ARR3P36575 388 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 CALHM3Q86XJ0 350 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 C20orf196Q8IYI0 205 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 OR4F15Q8NGB8 312 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 RHNO1Q9BSD3 238 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 NANSQ9NR45 359 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 ZNF229Q9UJW7 825 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 SLC7A7Q9UM01 511 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 USP22Q9UPT9 525 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
SPTLC1-207ENST00000488921 SLC35F4A4IF30 521 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 LRRN3E7EW58 273 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 ENTPD5O75356 428 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 SERPINI2O75830 405 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CSF3P09919 207 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CECR9P0C854 216 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 HLA-DOBP13765 273 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CBR1P16152 277 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 CAPZA2P47755 286 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 SNRPD2P62316 118 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 TUBA1BP68363 451 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 TUBA4AP68366 448 aa12.02□□□□□ -0.49
SPTLC1-207ENST00000488921 NAAAQ02083 359 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms