RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CENPHQ9H3R5 247 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 IL1RL2Q9HB29 575 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 PRSS16Q9NQE7 514 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 DEPPQ9NTK1 212 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 C20orf96Q9NUD7 363 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 NLE1Q9NVX2 485 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 SMPD3Q9NY59 655 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 KLRF1Q9NZS2 232 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 THYN1Q9P016 225 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 IL17CQ9P0M4 197 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 PSMC3IPQ9P2W1 217 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 EXTL2Q9UBQ6 330 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 PURGQ9UJV8 347 aaKnown RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 EMCNQ9ULC0 261 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 EXOGQ9Y2C4 368 aaKnown RBP3.33□□□□□ -1.88
PTCD3-216ENST00000487043 FBXO7Q9Y3I1 522 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 IKBKGQ9Y6K9 419 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 BRWD1Q9NSI6 2320 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 REV3LO60673 3130 aa3.33□□□□□ -1.88
PTCD3-216ENST00000487043 ANKRD36A6QL64 1941 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CDH23Q9H251 3354 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 TRGV8A0A0C4DH27 118 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 TSPAN11A1L157 253 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 LRIT2A6NDA9 550 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SMIM23A6NLE4 172 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 LRRC30A6NM36 301 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 WASHC1A8K0Z3 465 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MPTX1A8MV57 137 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 NPIPA2E9PIF3 369 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 GOLGA8TH3BQL2 631 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CASKO14936 926 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 STX7O15400 261 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A9O60656 530 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 PIAS1O75925 651 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZFAND5O76080 213 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CTSLP07711 333 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SNRPAP09012 282 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ALPIP09923 528 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 PIRTP0C851 137 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CFC1BP0CG36 223 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CFC1P0CG37 223 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 HLA-EP13747 358 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 IL9P15248 144 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SPRP35270 261 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF140P52738 457 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SLC18A1P54219 525 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 TMEM50BP56557 158 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MAGOHP61326 146 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SPIBQ01892 262 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZP4Q12836 540 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CHIT1Q13231 466 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ELAVL3Q14576 367 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 PON2Q15165 354 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 LRRC23Q53EV4 343 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MUC21Q5SSG8 566 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 KCTD16Q68DU8 428 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ATRAIDQ6UW56 229 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 TIFABQ6ZNK6 161 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 USP43Q70EL4 1123 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 GLT6D1Q7Z4J2 308 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 STK40Q8N2I9 435 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF781Q8N8C0 355 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF248Q8NDW4 579 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 OR4K2Q8NGD2 314 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 OR13C4Q8NGS5 318 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 DTX3LQ8TDB6 740 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 OR8D1Q8WZ84 308 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 DLX4Q92988 240 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 C11orf52Q96A22 123 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 NABP1Q96AH0 204 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 BIRC7Q96CA5 298 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ELMO2Q96JJ3 720 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ART5Q96L15 291 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 AGAP4Q96P64 663 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SMIM14Q96QK8 99 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 RBBP8Q99708 897 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 GABRG3Q99928 467 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 CABLES2Q9BTV7 478 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ALG12Q9BV10 488 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 FAM107BQ9H098 131 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MFSD1Q9H3U5 465 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SP140LQ9H930 580 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A7Q9HAW7 530 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A10Q9HAW8 530 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A8Q9HAW9 530 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ELL3Q9HB65 397 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ADGRL4Q9HBW9 690 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 HEBP1Q9NRV9 189 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 DCAF13Q9NV06 445 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 NDE1Q9NXR1 346 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SENP1Q9P0U3 644 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 THEGQ9P2T0 379 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 SLC2A6Q9UGQ3 507 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 FBXO5Q9UKT4 447 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF346Q9UL40 294 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 GAB2Q9UQC2 676 aa3.32□□□□□ -1.88
PTCD3-216ENST00000487043 MRPS7Q9Y2R9 242 aaKnown RBP3.32□□□□□ -1.88
PTCD3-216ENST00000487043 ARL5AQ9Y689 179 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms