RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TSPAN11A1L157 253 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF705EA8MWA4 302 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 WASH3PC4AMC7 463 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 GRM6O15303 877 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 FARS2O95363 451 aaKnown RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 AIFM1O95831 613 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 MAS1P04201 325 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ELFN1P0C7U0 828 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 HIST1H1CP16403 213 aaKnown RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ABCD3P28288 659 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 SOX2P48431 317 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 SRSF4Q08170 494 aaKnown RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 RBM39Q14498 530 aaKnown RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 OR7A5Q15622 319 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 FNDC3BQ53EP0 1204 aaKnown RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 NKAIN2Q5VXU1 208 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 GAREM2Q75VX8 874 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 BIVMQ86UB2 503 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 OR4K14Q8NGD5 310 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 OR5AP2Q8NGF4 316 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 OR1J2Q8NGS2 313 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF461Q8TAF7 563 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CD99L2Q8TCZ2 262 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF559Q9BR84 538 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 PAPOLGQ9BWT3 736 aaKnown RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 SAGE1Q9NXZ1 904 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 CES1P1Q9UKY3 287 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
CCDC171-208ENST00000486641 PCYT1BQ9Y5K3 369 aaPredicted RBP9.73□□□□□ -0.85
CCDC171-208ENST00000486641 HEATR5BQ9P2D3 2071 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 TRAV18A0A075B6X5 111 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CPED1A4D0V7 1026 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 GGT3PA6NGU5 568 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 C1orf196B1AJZ1 125 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 PRR32B1ATL7 298 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 ADAMTS4O75173 837 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 RPN2P04844 631 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CTSLP07711 333 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CSRP1P21291 193 aaKnown RBP9.72□□□□□ -0.85
CCDC171-208ENST00000486641 PPT1P50897 306 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 FABP9Q0Z7S8 132 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 RAB33AQ14088 237 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 NR0B2Q15466 257 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 GFOD2Q3B7J2 385 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 PRRT3Q5FWE3 981 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 VWA2Q5GFL6 755 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 ACER2Q5QJU3 275 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 FAM111BQ6SJ93 734 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 ENPP7Q6UWV6 458 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 DPPA4Q7L190 304 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 POMGNT2Q8NAT1 580 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CLEC1AQ8NC01 280 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 RPS4Y2Q8TD47 263 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 EDAQ92838 391 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 SLITRK2Q9H156 845 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 OR52A5Q9H2C5 316 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 DPEP2Q9H4A9 486 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 TMEM100Q9NV29 134 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 MED31Q9Y3C7 131 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 A0A1W2PPV9 198 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 GXYLT2A0PJZ3 443 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 TXNL1O43396 289 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 RDH16O75452 317 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CTAG2O75638 210 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 IFNGP01579 166 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CD34P28906 385 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 GRPRP30550 384 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CAPZA1P52907 286 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 EPHB3P54753 998 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CXADRP78310 365 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 CSNK1G2P78368 415 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 FHL1Q13642 323 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 GGTLC2Q14390 218 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 TPGS2Q68CL5 300 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 ANKRD16Q6P6B7 361 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 NDUFAF7Q7L592 441 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 SPSB2Q99619 263 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 EGLN1Q9GZT9 426 aa9.72□□□□□ -0.85
CCDC171-208ENST00000486641 RCC2Q9P258 522 aaKnown RBP9.72□□□□□ -0.85
CCDC171-208ENST00000486641 RPH3AQ9Y2J0 694 aaPredicted RBP9.72□□□□□ -0.85
CCDC171-208ENST00000486641 ERI3O43414 337 aaKnown RBP9.71□□□□□ -0.85
CCDC171-208ENST00000486641 NARSO43776 548 aaKnown RBP9.71□□□□□ -0.85
CCDC171-208ENST00000486641 ABLIM3O94929 683 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 RPP14O95059 124 aaKnown RBP9.71□□□□□ -0.85
CCDC171-208ENST00000486641 PRF1P14222 555 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 SDHAP31040 664 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 PRSS3P35030 304 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 DUSP8Q13202 625 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 DHRS2Q13268 280 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 HYAL4Q2M3T9 481 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 LIN54Q6MZP7 749 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 SLC48A1Q6P1K1 146 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 SLC35F3Q8IY50 421 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 GABRG1Q8N1C3 465 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 ACOT4Q8N9L9 421 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 OR51D1Q8NGF3 324 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 OR2L2Q8NH16 312 aa9.71□□□□□ -0.85
CCDC171-208ENST00000486641 TFGQ92734 400 aaPredicted RBP9.71□□□□□ -0.85
CCDC171-208ENST00000486641 FGF13Q92913 245 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms