RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TRAPPC13A5PLN9 417 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 ATP6V1G2-DDX39BF2Z307 99 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 AHCYP23526 432 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 CEACAM16Q2WEN9 425 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 C3orf36Q3SXR2 165 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 ERICH5Q6P6B1 374 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 TTC33Q6PID6 262 aaPredicted RBP16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 WDR88Q6ZMY6 472 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 DNM1P46Q6ZS02 220 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 PXKQ7Z7A4 578 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 SNX32Q86XE0 403 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 C20orf196Q8IYI0 205 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 FAM169BQ8N8A8 192 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 OR5J2Q8NH18 312 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF837Q96EG3 531 aaPredicted RBP16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 TXNDC15Q96J42 360 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 MPP4Q96JB8 637 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 EMC6Q9BV81 110 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 SLC7A7Q9UM01 511 aa16.05■□□□□ 0.16
PRPF40A-209ENST00000486100 SLC35F4A4IF30 521 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 M0R3G1 203 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 SLC22A2O15244 555 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 TUBA1BP68363 451 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 TUBA4AP68366 448 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 POU3F1Q03052 451 aaPredicted RBP16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 PHYHD1Q5SRE7 291 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 CARD17Q5XLA6 110 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 TUBA1AQ71U36 451 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 TSPYL5Q86VY4 417 aaPredicted RBP16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 CCDC36Q8IYA8 594 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 C10orf82Q8WW14 230 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 PROX1Q92786 737 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 KCNS3Q9BQ31 491 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 KATNB1Q9BVA0 655 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 REG4Q9BYZ8 158 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 SLC19A3Q9BZV2 496 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 MED4Q9NPJ6 270 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 MED29Q9NX70 200 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 BAG5Q9UL15 447 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 CAPN7Q9Y6W3 813 aa16.04■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF726A6NNF4 738 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF99A8MXY4 864 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 RNF223E7ERA6 249 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 CH25HO95992 272 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 IFNA14P01570 189 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 IGLV1-44P01699 117 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 CRYAAP02489 173 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 ADORA3P0DMS8 318 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 BMP4P12644 408 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 CBR1P16152 277 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 MDH1P40925 334 aaKnown RBP16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 CHRNB3Q05901 458 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 RAB35Q15286 201 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF74Q16587 644 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 ZNF426Q9BUY5 554 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 USP22Q9UPT9 525 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 SH3GLB1Q9Y371 365 aa16.03■□□□□ 0.16
PRPF40A-209ENST00000486100 H7C417 338 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 SSX4O60224 188 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 OR6A2O95222 327 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 IGKV3-15P01624 115 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 CECR9P0C854 216 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 NAAAQ02083 359 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 ZP4Q12836 540 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 CARM1Q86X55 608 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 PRSS27Q9BQR3 290 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 B3GAT2Q9NPZ5 323 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 NANSQ9NR45 359 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 TAS2R5Q9NYW4 299 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 PMF1-BGLAPU3KQ54 211 aa16.02■□□□□ 0.16
PRPF40A-209ENST00000486100 C11orf98E9PRG8 122 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 SERPINI2O75830 405 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 HIST1H2ABP04908 130 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 KDELR2P33947 212 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 ARR3P36575 388 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 NUDT6P53370 316 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 CAMK2DQ13557 499 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 SWI5Q1ZZU3 235 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 MST1LQ2TV78 715 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 HIST3H2AQ7L7L0 130 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 WDFY1Q8IWB7 410 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 OR6N1Q8NGY5 312 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 RP9Q8TA86 221 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 HIST1H2ACQ93077 130 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 RHNO1Q9BSD3 238 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 POLR2J2Q9GZM3 115 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 POLR2J3Q9H1A7 115 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 ARMCX1Q9P291 453 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 ZNF229Q9UJW7 825 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 POFUT2Q9Y2G5 429 aa16.01■□□□□ 0.15
PRPF40A-209ENST00000486100 FAM220BPB1ANY3 271 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 KPNA4O00629 521 aaPredicted RBP16■□□□□ 0.15
PRPF40A-209ENST00000486100 DYNC1I1O14576 645 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 ASAH2BP0C7U1 165 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 IFNGR1P15260 489 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 BIDP55957 195 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 DSCR9P59020 149 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 SLC35D2Q76EJ3 337 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 ZNF627Q7L945 461 aa16■□□□□ 0.15
PRPF40A-209ENST00000486100 LRRC17Q8N6Y2 441 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms