RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 GPR4P46093 362 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 SLC9A3P48764 834 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 CRISP1P54107 249 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 PON3Q15166 354 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 GUSBP1Q15486 140 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 TESK1Q15569 626 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 C3orf33Q6P1S2 294 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 USP51Q70EK9 711 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 FAM214BQ7L5A3 538 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 SLC43A2Q8N370 569 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 OR6S1Q8NH40 331 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 SLC25A43Q8WUT9 341 aaPredicted RBP15.17■□□□□ 0.02
VIM-205ENST00000485947 LIPHQ8WWY8 451 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 GMPPAQ96IJ6 420 aaPredicted RBP15.17■□□□□ 0.02
VIM-205ENST00000485947 ADGRG7Q96K78 797 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 GPA33Q99795 319 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 TIGARQ9NQ88 270 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 C20orf141Q9NUB4 165 aa15.17■□□□□ 0.02
VIM-205ENST00000485947 TRAV36DV7A0A075B6V5 113 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 TMEM72A0PK05 275 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 UNC119BA6NIH7 251 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 EFCAB9A8MZ26 197 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 EIF1AYO14602 144 aaKnown RBP15.16■□□□□ 0.02
VIM-205ENST00000485947 NPIPB7O75200 414 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 OR7A10O76100 309 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 SYNGR4O95473 234 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 SAGP10523 405 aaPredicted RBP15.16■□□□□ 0.02
VIM-205ENST00000485947 MAKP20794 623 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 MYF6P23409 242 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 EGR4Q05215 589 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 SELENBP1Q13228 472 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 ANKDD1AQ495B1 522 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 LUZP2Q86TE4 346 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 CNEP1R1Q8N9A8 125 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 SETD9Q8NE22 299 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 OR5M1Q8NGP8 315 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 OR10D3Q8NH80 312 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 OR2V1Q8NHB1 315 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 FNDC9Q8TBE3 224 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 POC1BQ8TC44 478 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 SMPDL3BQ92485 455 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 DDIT4LQ96D03 193 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 POM121Q96HA1 1249 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 ZNF845Q96IR2 970 aaPredicted RBP15.16■□□□□ 0.02
VIM-205ENST00000485947 HRASLS5Q96KN8 279 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 PRRG4Q9BZD6 226 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 GP6Q9HCN6 339 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 NDRG4Q9ULP0 352 aaKnown RBP15.16■□□□□ 0.02
VIM-205ENST00000485947 EMC9Q9Y3B6 208 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 CDH10Q9Y6N8 788 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 HSPE1-MOB4S4R3N1 261 aa15.16■□□□□ 0.02
VIM-205ENST00000485947 KIAA1549Q9HCM3 1950 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 ZAR1LA6NP61 321 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 H3BN98 237 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 CDC42EP2O14613 210 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 CASKO14936 926 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 OR2T1O43869 369 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 CGAP01215 116 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 TP53P04637 393 aaPredicted RBP15.15■□□□□ 0.02
VIM-205ENST00000485947 PTNP21246 168 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 CD79BP40259 229 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 EIF1AXP47813 144 aaKnown RBP15.15■□□□□ 0.02
VIM-205ENST00000485947 CLK1P49759 484 aaKnown RBP15.15■□□□□ 0.02
VIM-205ENST00000485947 MFSD13AQ14CX5 517 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 CTU2Q2VPK5 515 aaKnown RBP15.15■□□□□ 0.02
VIM-205ENST00000485947 ZNF620Q6ZNG0 422 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 SLC46A3Q7Z3Q1 461 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 MED12LQ86YW9 2145 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 C8orf59Q8N0T1 100 aaPredicted RBP15.15■□□□□ 0.02
VIM-205ENST00000485947 OR6K3Q8NGY3 331 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 TEX47Q8TBZ9 253 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 OSTF1Q92882 214 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 KLHL15Q96M94 604 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 APOL4Q9BPW4 351 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 POTEKPQ9BYX7 375 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 FKRPQ9H9S5 495 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 SLC25A19Q9HC21 320 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 IL20Q9NYY1 176 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 GMPPBQ9Y5P6 360 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 ABCA2Q9BZC7 2435 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 DNHD1Q96M86 4753 aa15.15■□□□□ 0.02
VIM-205ENST00000485947 SH3D21A4FU49 640 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 H0YC42 278 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 SS18L1O75177 396 aaPredicted RBP15.14■□□□□ 0.01
VIM-205ENST00000485947 SOX14O95416 240 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 AHSA1O95433 338 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 MT-ATP6P00846 226 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 GGT2P36268 569 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 POLR2IP36954 125 aaKnown RBP15.14■□□□□ 0.01
VIM-205ENST00000485947 TPD52P55327 224 aaPredicted RBP15.14■□□□□ 0.01
VIM-205ENST00000485947 CARD18P57730 90 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 PTGES3Q15185 160 aaKnown RBP15.14■□□□□ 0.01
VIM-205ENST00000485947 ZNF74Q16587 644 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 FAM69AQ5T7M9 428 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 ZNF691Q5VV52 312 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 C1orf140Q5VVS0 124 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 BTLAQ7Z6A9 289 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 OAFQ86UD1 273 aa15.14■□□□□ 0.01
VIM-205ENST00000485947 CPNE4Q96A23 557 aaPredicted RBP15.14■□□□□ 0.01
VIM-205ENST00000485947 PLSCR4Q9NRQ2 329 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms