RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 LILRB1Q8NHL6 650 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 PFN4Q8NHR9 129 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 COQ8AQ8NI60 647 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ADAMTS15Q8TE58 950 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ST8SIA2Q92186 375 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 RGP1Q92546 391 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 HOXB13Q92826 284 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 CDS1Q92903 461 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ARRDC3Q96B67 414 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ZG16BQ96DA0 208 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 BPIFA2Q96DR5 249 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 TCEAL4Q96EI5 215 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 PHYHIPLQ96FC7 376 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 S100A16Q96FQ6 103 aaKnown RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC35A4Q96G79 324 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 PRAP1Q96NZ9 151 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 OR14A2Q96R54 314 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 DMRTA2Q96SC8 542 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 STACQ99469 402 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF559Q9BR84 538 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 CHIAQ9BZP6 476 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 NMNAT2Q9BZQ4 307 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ARL6Q9H0F7 186 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ENKD1Q9H0I2 346 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ALX4Q9H161 411 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 BEX1Q9HBH7 125 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 MCCC2Q9HCC0 563 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC6A20Q9NP91 592 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 NOX4Q9NPH5 578 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 DUSP22Q9NRW4 184 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 C20orf141Q9NUB4 165 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 NKIRAS2Q9NYR9 191 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 NCDNQ9UBB6 729 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 MTFP1Q9UDX5 166 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 OR5V1Q9UGF6 321 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 CHRNA9Q9UGM1 479 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ATPIF1Q9UII2 106 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 GMEB2Q9UKD1 530 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 CLEC4AQ9UMR7 237 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 COPS3Q9UNS2 423 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 MRPS7Q9Y2R9 242 aaKnown RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF281Q9Y2X9 895 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC6A5Q9Y345 797 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 MED31Q9Y3C7 131 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 AK6Q9Y3D8 172 aaKnown RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 WDR45Q9Y484 360 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 PCYT1BQ9Y5K3 369 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF780BQ9Y6R6 833 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 NUP210LQ5VU65 1888 aa4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 NUP214P35658 2090 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-206ENST00000485737 DENND4CQ5VZ89 1909 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 A0A087WV62 115 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 FXYD6-FXYD2A0A087WZ82 144 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 TRBV5-7A0A0A0MS05 114 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 TRAV14DV4A0A0A6YYC5 116 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 A0A0D9SG52 128 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 A0A0G2JN53 185 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 TRBV2A0A0J9YWF9 115 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 CENPVL1A0A0U1RR11 272 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 A0A1B0GTI1 187 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 EDDM13A0A1B0GTR0 161 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 A0A1W2PS29 197 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 TCRBV16S1A1N1A0A5B0 115 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 GXYLT2A0PJZ3 443 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 PQLC2LA1A4F0 135 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 RAB19A4D1S5 217 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ACOD1A6NK06 481 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 GLOD5A6NK44 160 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF98A6NK75 572 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 OR5K4A6NMS3 321 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 HSPB2A8KAH6 182 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 H0Y8X5 98 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 TEX46H3BTG2 121 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ARPC3O15145 178 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 BCL2L11O43521 198 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 XRCC3O43542 346 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 LDB3O75112 727 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF254O75437 659 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 CDC123O75794 336 aaPredicted RBP4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF432O94892 652 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF205O95201 554 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 PPP1R3DO95685 299 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 LRG1P02750 347 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 RLN2P04090 185 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 CISD3P0C7P0 127 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC25A4P12235 298 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ADRB3P13945 408 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 EPCAMP16422 314 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 LAG3P18627 525 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 SRMP19623 302 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 CDK2P24941 298 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 EDNRAP25101 427 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 MST1P26927 711 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 AGTR1P30556 359 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 DCTDP32321 178 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 PTGER1P34995 402 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 RORAP35398 523 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 MAP3K8P41279 467 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 ART1P52961 327 aa4.27□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC25A1P53007 311 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms