RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 LOC102725191A0A1B0GVB3 256 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 A0A1B0GVC2 190 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 KDM4EB2RXH2 506 aaPredicted RBP18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 PRR23D1E9PI22 279 aaPredicted RBP18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 NPIPA5E9PKD4 350 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 SMAD9O15198 467 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 XPNPEP2O43895 674 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 FAM20BO75063 409 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 PRR23D2P0DMB1 279 aaPredicted RBP18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 KLK2P20151 261 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ITGADQ13349 1161 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 MESTQ5EB52 335 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 NXNL2Q5VZ03 156 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 PLBD1Q6P4A8 553 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 BCDIN3DQ7Z5W3 292 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 CPOQ8IVL8 374 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF582Q96NG8 517 aaPredicted RBP18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 UCN2Q96RP3 112 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 PLSCR2Q9NRY7 297 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 PLCXD1Q9NUJ7 323 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 NPIPA1Q9UND3 350 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 FAM183AA6NL82 134 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 SNTNA6NMZ2 147 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 RAMP1O60894 148 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ACVR2AP27037 513 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ACVR1BP36896 505 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 NUDT6P53370 316 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 SLC35D2Q76EJ3 337 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ADCK1Q86TW2 530 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ARIH2OSQ8N7S6 290 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 CYB561A3Q8NBI2 242 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF519Q8TB69 540 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 OTULINQ96BN8 352 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 NMNAT3Q96T66 252 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 TNFRSF10DQ9UBN6 386 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 TPRKBQ9Y3C4 175 aa18.28■□□□□ 0.52
VCPKMT-203ENST00000484763 M0R3G1 203 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 AQP7O14520 342 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 XKRYO14609 159 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 PRODHO43272 600 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 CPN1P15169 458 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 IFNGR1P15260 489 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF43P17038 809 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 GABARAPL2P60520 117 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 C1DQ13901 141 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 MELKQ14680 651 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 POU4F3Q15319 338 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 AADACL4Q5VUY2 407 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 FAM205BPQ63HN1 556 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 LEG1Q6P5S2 330 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 FAM180AQ6UWF9 173 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 GID4Q8IVV7 300 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 NPEPL1Q8NDH3 523 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 RFKQ969G6 155 aa18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 ZNF845Q96IR2 970 aaPredicted RBP18.27■□□□□ 0.52
VCPKMT-203ENST00000484763 BOD1L1Q8NFC6 3051 aa18.27■□□□□ 0.51
VCPKMT-203ENST00000484763 TRAF3IP2O43734 574 aaPredicted RBP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 BCL10O95999 233 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 ARMC4Q5T2S8 1044 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 ABLIM2Q6H8Q1 611 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 BBS1Q8NFJ9 593 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 ASB10Q8WXI3 467 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 WDYHV1Q96HA8 205 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 SF3B5Q9BWJ5 86 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 AMBNQ9NP70 447 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 H2AFY2Q9P0M6 372 aaPredicted RBP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 KLHL13Q9P2N7 655 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 ZMIZ1Q9ULJ6 1067 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 TRIM64A6NGJ6 449 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 A6NIZ1 184 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 CDKN2AP42771 156 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 CDH11P55287 796 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 RAP1BP61224 184 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 RAP1AP62834 184 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 C3AR1Q16581 482 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 NIPAL3Q6P499 406 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 HDDC2Q7Z4H3 204 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 Q8NA96 180 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 ZNF540Q8NDQ6 660 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 SARAFQ96BY9 339 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 SNX18Q96RF0 628 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 HCAR1Q9BXC0 346 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 MED20Q9H944 212 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 MED29Q9NX70 200 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 MCTS1Q9ULC4 181 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 CAMK2AQ9UQM7 478 aa18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 RPL36Q9Y3U8 105 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-203ENST00000484763 ZZEF1O43149 2961 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 PIEZO2Q9H5I5 2752 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 OR6C68A6NDL8 312 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 EIF4E1BA6NMX2 242 aaKnown RBP18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 NPIPA2E9PIF3 369 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 NPIPA3F8WFD2 350 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 ARHGEF9O43307 516 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 SYNGR4O95473 234 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 EEF1B2P24534 225 aaKnown RBP18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 ZNF91Q05481 1191 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 NHLRC1Q6VVB1 395 aa18.25■□□□□ 0.51
VCPKMT-203ENST00000484763 FCRLAQ7L513 359 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms