RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LSM7Q9UK45 103 aaKnown RBP3.68□□□□□ -1.82
PTCD3-214ENST00000483925 RARRES3Q9UL19 164 aa3.68□□□□□ -1.82
PTCD3-214ENST00000483925 MGAT4AQ9UM21 535 aa3.68□□□□□ -1.82
PTCD3-214ENST00000483925 UBQLN1Q9UMX0 589 aaKnown RBP3.68□□□□□ -1.82
PTCD3-214ENST00000483925 PPP1R3CQ9UQK1 317 aa3.68□□□□□ -1.82
PTCD3-214ENST00000483925 YARS2Q9Y2Z4 477 aaKnown RBP3.68□□□□□ -1.82
PTCD3-214ENST00000483925 FBXO7Q9Y3I1 522 aa3.68□□□□□ -1.82
PTCD3-214ENST00000483925 PUS1Q9Y606 427 aaKnown RBP eCLIP3.68□□□□□ -1.82
PTCD3-214ENST00000483925 CSNK1G3Q9Y6M4 447 aa3.68□□□□□ -1.82
PTCD3-214ENST00000483925 NOTCH4Q99466 2003 aa3.68□□□□□ -1.82
PTCD3-214ENST00000483925 JCADQ9P266 1359 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 TRABD2BA6NFA1 517 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 SLC22A20A6NK97 555 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 SLCO1B7G3V0H7 640 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 GFYI3L273 518 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 CDC7O00311 574 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 RAD51BO15315 384 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 MAGEC1O60732 1142 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 KLK1P06870 262 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 PVRP15151 417 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 MGMTP16455 207 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 SSR4P51571 173 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 STX17P56962 302 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 CYCSP99999 105 aaKnown RBP3.67□□□□□ -1.82
PTCD3-214ENST00000483925 PUDPQ08623 228 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 DPYSL3Q14195 570 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 DMC1Q14565 340 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 KCNJ11Q14654 390 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 TRAM2Q15035 370 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 RPEL1Q2QD12 228 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 UTF1Q5T230 341 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 FAM219BQ5XKK7 198 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 C9orf139Q6ZV77 190 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 C16orf82Q7Z2V1 217 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 PLA2G4DQ86XP0 818 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 CDKL3Q8IVW4 592 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-214ENST00000483925 EID2Q8N6I1 236 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 ZNRF1Q8ND25 227 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 KLHDC9Q8NEP7 349 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 OR5K2Q8NHB8 316 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 SLC7A13Q8TCU3 470 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 CDKL2Q92772 493 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 RAB3CQ96E17 227 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 MOCOSQ96EN8 888 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 MS4A14Q96JA4 679 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 OR8B4Q96RC9 309 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 HSD17B14Q9BPX1 270 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 CNPY3Q9BT09 278 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 FAIM2Q9BWQ8 316 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 DRC3Q9H069 523 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 LIME1Q9H400 295 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 LRRC19Q9H756 370 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 PATZ1Q9HBE1 687 aaKnown RBP3.67□□□□□ -1.82
PTCD3-214ENST00000483925 PAK1IP1Q9NWT1 392 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-214ENST00000483925 SLC17A7Q9P2U7 560 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 MLXQ9UH92 298 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 PPIL1Q9Y3C6 166 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 UBN2Q6ZU65 1347 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 CDHR2Q9BYE9 1310 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 UNC13AQ9UPW8 1703 aa3.67□□□□□ -1.82
PTCD3-214ENST00000483925 A0A1B0GTI1 187 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 VSTM2BA6NLU5 285 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 PRMT5O14744 637 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 EEDO75530 441 aaKnown RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 NXPH4O95158 308 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 IGHG1P01857 330 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 FGGP02679 453 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 CTRB1P17538 263 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 IDSP22304 550 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 SLC2A5P22732 501 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 IGFBP5P24593 272 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 PDHA2P29803 388 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 EPHX2P34913 555 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ARR3P36575 388 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ACVR1BP36896 505 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 PTGDSP41222 190 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 PLK1P53350 603 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 CRISP1P54107 249 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 UBE2MP61081 183 aaKnown RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 RPS15AP62244 130 aaKnown RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 RPS14P62263 151 aaKnown RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 MRPS11P82912 194 aaKnown RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 SLC10A7Q0GE19 358 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 SLAMF1Q13291 335 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 PIGHQ14442 188 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 NECTIN1Q15223 517 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 QRICH1Q2TAL8 776 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 C5orf47Q569G3 176 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ZNF691Q5VV52 312 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ZNF57Q68EA5 555 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 TIGD3Q6B0B8 471 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 CTRB2Q6GPI1 263 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 FRRS1Q6ZNA5 592 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 CYB561A3Q8NBI2 242 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 NECAP1Q8NC96 275 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 CXorf40AQ8TE69 158 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-214ENST00000483925 SMARCD2Q92925 531 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 NEIL2Q969S2 332 aa3.66□□□□□ -1.82
PTCD3-214ENST00000483925 CPB2Q96IY4 423 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms