RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 C10orf105Q8TEF2 133 aa17.26■□□□□ 0.35
HPS4-213ENST00000483631 PRR14Q9BWN1 585 aa17.26■□□□□ 0.35
HPS4-213ENST00000483631 ZNF442Q9H7R0 627 aa17.26■□□□□ 0.35
HPS4-213ENST00000483631 KAT8Q9H7Z6 458 aaKnown RBP17.26■□□□□ 0.35
HPS4-213ENST00000483631 ANK3Q12955 4377 aaKnown RBP17.25■□□□□ 0.35
HPS4-213ENST00000483631 KIAA1324LA8MWY0 1029 aaPredicted RBP17.25■□□□□ 0.35
HPS4-213ENST00000483631 VSTM5A8MXK1 200 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 M0QX08 132 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 CHP2O43745 196 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 VIMP08670 466 aaKnown RBP17.25■□□□□ 0.35
HPS4-213ENST00000483631 TMEM249Q2WGJ8 235 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 INTS11Q5TA45 600 aaKnown RBP17.25■□□□□ 0.35
HPS4-213ENST00000483631 NHLRC1Q6VVB1 395 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 RETREG3Q86VR2 466 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 HIPK1Q86Z02 1210 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 C20orf196Q8IYI0 205 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 RASSF5Q8WWW0 418 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 FBXO17Q96EF6 278 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 MCHR1Q99705 422 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 B3GAT2Q9NPZ5 323 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 ADAM21Q9UKJ8 722 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 USP22Q9UPT9 525 aa17.25■□□□□ 0.35
HPS4-213ENST00000483631 COL6A5A8TX70 2615 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 A8MV72 311 aaPredicted RBP17.24■□□□□ 0.35
HPS4-213ENST00000483631 HPRP00739 348 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 H2AFXP16104 143 aaPredicted RBP17.24■□□□□ 0.35
HPS4-213ENST00000483631 PCGF2P35227 344 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 MTPNP58546 118 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 IL1RL1Q01638 556 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 PMS2P3Q13401 168 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 DUSP7Q16829 419 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 SMYD1Q8NB12 490 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 RNF217Q8TC41 542 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 WFDC6Q9BQY6 131 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 PCDHAC1Q9H158 963 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 PLK3Q9H4B4 646 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 DENND2DQ9H6A0 471 aaPredicted RBP17.24■□□□□ 0.35
HPS4-213ENST00000483631 TMEM160Q9NX00 188 aa17.24■□□□□ 0.35
HPS4-213ENST00000483631 PLPP3O14495 311 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 PPOXP50336 477 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 PDLIM4P50479 330 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 POU3F1Q03052 451 aaPredicted RBP17.23■□□□□ 0.35
HPS4-213ENST00000483631 NFYCQ13952 458 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 ADIPOQQ15848 244 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 GPR32P1Q8NGA4 272 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 OR6T1Q8NGN1 323 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 OR5J2Q8NH18 312 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 MPP4Q96JB8 637 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 MOGAT1Q96PD6 335 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 SH3GL1Q99961 368 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 SLC19A3Q9BZV2 496 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 NPHS2Q9NP85 383 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 YAE1D1Q9NRH1 226 aa17.23■□□□□ 0.35
HPS4-213ENST00000483631 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.22■□□□□ 0.352e-11■■■■■ 43
HPS4-213ENST00000483631 A0A0G2JND7 137 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 SLC35F4A4IF30 521 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 ZNF726A6NNF4 738 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 M0R3H8 397 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 NPPAP01160 153 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 OR4A8P0C604 315 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 HLA-DOBP13765 273 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 CBLP22681 906 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 CALCRP30988 508 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 TUBA1BP68363 451 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 TUBA4AP68366 448 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 SELPLGQ14242 412 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 TRMT5Q32P41 509 aaKnown RBP17.22■□□□□ 0.35
HPS4-213ENST00000483631 COQ5Q5HYK3 327 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 C6orf52Q5T4I8 152 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 TUBA1AQ71U36 451 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 CCDC80Q76M96 950 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 ZNF837Q96EG3 531 aaPredicted RBP17.22■□□□□ 0.35
HPS4-213ENST00000483631 SORCS2Q96PQ0 1159 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 ZNF426Q9BUY5 554 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 B3GNT2Q9NY97 397 aa17.22■□□□□ 0.35
HPS4-213ENST00000483631 IGHV2OR16-5A0A0B4J2B6 119 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 TRAPPC13A5PLN9 417 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 VWC2LB2RUY7 222 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 M0R3G1 203 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 GPRIN2O60269 458 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 CD247P20963 164 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 USF1P22415 310 aaPredicted RBP17.21■□□□□ 0.35
HPS4-213ENST00000483631 IDH3GP51553 393 aaPredicted RBP17.21■□□□□ 0.35
HPS4-213ENST00000483631 HGFACQ04756 655 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 ZP4Q12836 540 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 CYLC2Q14093 348 aaPredicted RBP17.21■□□□□ 0.35
HPS4-213ENST00000483631 NPTX1Q15818 432 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 VMACQ2NL98 169 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 ENTPD8Q5MY95 495 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 PHYHD1Q5SRE7 291 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 SLC46A3Q7Z3Q1 461 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 MDP1Q86V88 176 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 C10orf53Q8N6V4 93 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 OR10A6Q8NH74 314 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 ADAMTS16Q8TE57 1224 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 NANOS1Q8WY41 292 aaKnown RBP17.21■□□□□ 0.35
HPS4-213ENST00000483631 HTRA1Q92743 480 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 THOC1Q96FV9 657 aaKnown RBP17.21■□□□□ 0.35
HPS4-213ENST00000483631 FBXL3Q9UKT7 428 aa17.21■□□□□ 0.35
HPS4-213ENST00000483631 MALRD1Q5VYJ5 2156 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms