RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CHST2Q9Y4C5 530 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 MMACHCQ9Y4U1 282 aa7.03□□□□□ -1.28
SNX13-208ENST00000482558 CHD7Q9P2D1 2997 aa7.02□□□□□ -1.28
SNX13-208ENST00000482558 FANCMQ8IYD8 2048 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 TRDV1A0A1B0GX56 115 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 RIIAD1A6NNX1 92 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 DSCR3O14972 297 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 MBTPS2O43462 519 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 IDH3BO43837 385 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 PAGE4O60829 102 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 SNRNP200O75643 2136 aaKnown RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 GPX5O75715 221 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 KCNK2O95069 426 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 GNSP15586 552 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 SLC6A6P31641 620 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 RANBP1P43487 201 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 PCP4P48539 62 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ATP12AP54707 1039 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ACTC1P68032 377 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ACTA1P68133 377 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ZNF273Q14593 569 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ISXQ2M1V0 245 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ARHGAP11AQ6P4F7 1023 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ULK3Q6PHR2 472 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 CD200R1LQ6Q8B3 271 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 SMARCD3Q6STE5 483 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 METAP1DQ6UB28 335 aaPredicted RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 MEPCEQ7L2J0 689 aaKnown RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 CCDC190Q86UF4 302 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 C17orf82Q86X59 251 aaPredicted RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 NKAIN4Q8IVV8 208 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 OR4N5Q8IXE1 308 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ARL14Q8N4G2 192 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 IQCF1Q8N6M8 205 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 OR4C6Q8NH72 309 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 FANK1Q8TC84 345 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 HAVCR2Q8TDQ0 301 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ACOT12Q8WYK0 555 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 SLC25A46Q96AG3 418 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ZG16BQ96DA0 208 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 BPIFA2Q96DR5 249 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ART5Q96L15 291 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 OR1F2PQ96R84 312 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 GPA33Q99795 319 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 LRRC61Q9BV99 259 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 UBQLN3Q9H347 655 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 EGLN3Q9H6Z9 239 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 FOLH1BQ9HBA9 442 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 EXOSC4Q9NPD3 245 aaKnown RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 PRTFDC1Q9NRG1 225 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 CMC2Q9NRP2 79 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 HAO2Q9NYQ3 351 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 KLHL21Q9UJP4 597 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ZNF223Q9UK11 482 aaPredicted RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 GMEB2Q9UKD1 530 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 NDRG2Q9UN36 371 aaKnown RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 SPIN1Q9Y657 262 aaPredicted RBP7.02□□□□□ -1.29
SNX13-208ENST00000482558 MYO9BQ13459 2157 aa7.02□□□□□ -1.29
SNX13-208ENST00000482558 ARPC4-TTLL3A0A0A6YYG9 625 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 IGHV1OR15-9A0A0B4J2B8 117 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 A0A0B4J2E0 115 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 A0A1B0GX12 115 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 A0A1W2PR77 199 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 A0A1W2PS29 197 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 OOEPA6NGQ2 149 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 B4DGG1 531 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PRR23D1E9PI22 279 aaPredicted RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 LMO7DNF2Z398 122 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 SGK494L7N484 410 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 M0R129 80 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 POLR1CO15160 346 aaPredicted RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 LDB3O75112 727 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 RDH16O75452 317 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 KNG1P01042 644 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 IGFBP1P08833 259 aaPredicted RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 HBQ1P09105 142 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PRR23D2P0DMB1 279 aaPredicted RBP7.01□□□□□ -1.29
SNX13-208ENST00000482558 PNMTP11086 282 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 IFI30P13284 250 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PVRP15151 417 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 GYPEP15421 78 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ST6GAL1P15907 406 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ZNF3P17036 446 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 HK1P19367 917 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 F8A1P23610 371 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 SDC2P34741 201 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ETV5P41161 510 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 SLC1A3P43003 542 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ETV1P50549 477 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 GAS1P54826 345 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 LGALS3BPQ08380 585 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 FUT7Q11130 342 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 FGFBP1Q14512 234 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 DDI2Q5TDH0 399 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 LCN1P1Q5VSP4 162 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PAMR1Q6UXH9 720 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 QSOX2Q6ZRP7 698 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 KMT5CQ86Y97 462 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 PARP16Q8N5Y8 322 aa7.01□□□□□ -1.29
SNX13-208ENST00000482558 ACBD7Q8N6N7 88 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms