RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 CASP6P55212 293 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 CTXN1P60606 82 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 CDK5Q00535 292 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 RIPPLY2Q5TAB7 128 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 SLC27A4Q6P1M0 643 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 CREB3L2Q70SY1 520 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 P4HA3Q7Z4N8 544 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 GALNT5Q7Z7M9 940 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 GPAT4Q86UL3 456 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 GALNT4Q8N4A0 578 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 ZIC4Q8N9L1 334 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 ZNF519Q8TB69 540 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 ADAD1Q96M93 576 aaKnown RBP11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 DMRTA2Q96SC8 542 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 MBOAT4Q96T53 435 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 VKORC1Q9BQB6 163 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 TTYH2Q9BSA4 534 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 KATNB1Q9BVA0 655 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 TSSK6Q9BXA6 273 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 POLDIP3Q9BY77 421 aaKnown RBP11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 ENKD1Q9H0I2 346 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 TOR3AQ9H497 397 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 TINAGQ9UJW2 476 aa11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 NCOA6Q14686 2063 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC12-218ENST00000479897 ESPL1Q14674 2120 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SLC16A6O15403 523 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SNAP29O95721 258 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 F13BP05160 661 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 YES1P07947 543 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 IGFBP1P08833 259 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 EPHA2P29317 976 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 AGTR1P30556 359 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SDHAP31040 664 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 RPL4P36578 427 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 GIPRP48546 466 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 HSPA13P48723 471 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SMSP52788 366 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 AQP4P55087 323 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 RPL27P61353 136 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 IL1RL1Q01638 556 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 KEAP1Q14145 624 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 ACKR1Q16570 336 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 ARMC4Q5T2S8 1044 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SLX4IPQ5VYV7 408 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SLC35D2Q76EJ3 337 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 ADCK1Q86TW2 530 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 MCEMP1Q8IX19 187 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 KDM8Q8N371 416 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 OR4Q3Q8NH05 313 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 OR6X1Q8NH79 312 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 ASB10Q8WXI3 467 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 HRASLS5Q96KN8 279 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 SNX18Q96RF0 628 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 IFT27Q9BW83 186 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 PRRG3Q9BZD7 231 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 RIBC2Q9H4K1 309 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 IL20RAQ9UHF4 553 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 ADAM18Q9Y3Q7 739 aa11.15□□□□□ -0.62
TRAPPC12-218ENST00000479897 HIVEP3Q5T1R4 2406 aa11.15□□□□□ -0.63
TRAPPC12-218ENST00000479897 H0YAE9 185 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 ZNF432O94892 652 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 TOXO94900 526 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 PPP1R3DO95685 299 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 BCL10O95999 233 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 GLI4P10075 376 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 IFNGR1P15260 489 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 MRPL49Q13405 166 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 C1DQ13901 141 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 GINS1Q14691 196 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 MESTQ5EB52 335 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 EEF1A1P5Q5VTE0 462 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 C12orf73Q69YU5 71 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 TMEM211Q6ICI0 200 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 PLXDC2Q6UX71 529 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 IZUMO2Q6UXV1 221 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 IGFN1Q86VF2 1251 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 ATCAYQ86WG3 371 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 TUSC5Q8IXB3 177 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 RPRMLQ8N4K4 120 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 MARVELD2Q8N4S9 558 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 ARIH2OSQ8N7S6 290 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 ZNF570Q96NI8 536 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 ADI1Q9BV57 179 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 TEX12Q9BXU0 123 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 CMC2Q9NRP2 79 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 FAM118AQ9NWS6 357 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 MED29Q9NX70 200 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 NDRG4Q9ULP0 352 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 MEMO1Q9Y316 297 aa11.14□□□□□ -0.63
TRAPPC12-218ENST00000479897 EMC9Q9Y3B6 208 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms