RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 C20orf96Q9NUD7 363 aaPredicted RBP3.76□□□□□ -1.81
UPF3B-203ENST00000478840 LYARQ9NX58 379 aaKnown RBP3.76□□□□□ -1.81
UPF3B-203ENST00000478840 KCNIP1Q9NZI2 227 aa3.76□□□□□ -1.81
UPF3B-203ENST00000478840 CD274Q9NZQ7 290 aa3.76□□□□□ -1.81
UPF3B-203ENST00000478840 TBC1D24Q9ULP9 559 aa3.76□□□□□ -1.81
UPF3B-203ENST00000478840 MMP17Q9ULZ9 603 aa3.76□□□□□ -1.81
UPF3B-203ENST00000478840 AKNAQ7Z591 1439 aa3.76□□□□□ -1.81
UPF3B-203ENST00000478840 TRBV9A0A0B4J1U6 114 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 SIRPB1O00241 398 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 NDUFAB1O14561 156 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 DYNC1I1O14576 645 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 AGPAT2O15120 278 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 MGRN1O60291 552 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ERLIN2O94905 339 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 PSMB1P20618 241 aaKnown RBP3.75□□□□□ -1.81
UPF3B-203ENST00000478840 STOMP27105 288 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 RORAP35398 523 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ATP5C1P36542 298 aaKnown RBP3.75□□□□□ -1.81
UPF3B-203ENST00000478840 MAGEA1P43355 309 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 OR3A4PP47883 348 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 TMED10P49755 219 aaKnown RBP3.75□□□□□ -1.81
UPF3B-203ENST00000478840 DIO3P55073 304 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 SELENOTP62341 195 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 CSNK1G2P78368 415 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 PAX5Q02548 391 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 C22orf42Q6IC83 251 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ZNF836Q6ZNA1 936 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 TMEM135Q86UB9 458 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 LHFPL3Q86UP9 236 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 FBXO16Q8IX29 292 aaPredicted RBP3.75□□□□□ -1.81
UPF3B-203ENST00000478840 BBS1Q8NFJ9 593 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 OR52K1Q8NGK4 314 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 GLYATL2Q8WU03 294 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ANKRD49Q8WVL7 239 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ISG20Q96AZ6 181 aaKnown RBP3.75□□□□□ -1.81
UPF3B-203ENST00000478840 TMEM246Q9BRR3 403 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 FANCEQ9HB96 536 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 TMEM165Q9HC07 324 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ADAP2Q9NPF8 381 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 EXD2Q9NVH0 621 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 QPCTLQ9NXS2 382 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ABCD2Q9UBJ2 740 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 PEF1Q9UBV8 284 aaKnown RBP3.75□□□□□ -1.81
UPF3B-203ENST00000478840 ASF1AQ9Y294 204 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 RLFQ13129 1914 aa3.75□□□□□ -1.81
UPF3B-203ENST00000478840 THSD7BQ9C0I4 1608 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 KLF18A0A0U1RQI7 1052 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 EPOPA6NHQ4 379 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 MRPS12O15235 138 aaKnown RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 TCN1P20061 433 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 CDKN1BP46527 198 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 RPS5P46782 204 aaKnown RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 SSR4P51571 173 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 IRX3P78415 501 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 TGFBR3Q03167 851 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 LIPEQ05469 1076 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 GPNMBQ14956 572 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 ATP6AP1Q15904 470 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 HADHQ16836 314 aaKnown RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 KLHL40Q2TBA0 621 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 PIP5KL1Q5T9C9 394 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 ANGPTL8Q6UXH0 198 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 Q6ZR54 194 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 SLC16A14Q7RTX9 510 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 MYPOPQ86VE0 399 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 IQCKQ8N0W5 287 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 GPD1LQ8N335 351 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 VN1R2Q8NFZ6 395 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 MARCH1Q8TCQ1 289 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 CCDC126Q96EE4 140 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 BCL7BQ9BQE9 202 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 PELOQ9BRX2 385 aaKnown RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 ANKRD60Q9BZ19 345 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 ELOVL6Q9H5J4 265 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 MRPL47Q9HD33 250 aaKnown RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 FGF20Q9NP95 211 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 CALYQ9NYX4 217 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 PDP1Q9P0J1 537 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 PACSIN2Q9UNF0 486 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 TRAF3IP3Q9Y228 551 aa3.74□□□□□ -1.81
UPF3B-203ENST00000478840 RAI1Q7Z5J4 1906 aaPredicted RBP3.74□□□□□ -1.81
UPF3B-203ENST00000478840 PHF3Q92576 2039 aaKnown RBP3.73□□□□□ -1.81
UPF3B-203ENST00000478840 LRRIQ3A6PVS8 624 aaPredicted RBP3.73□□□□□ -1.81
UPF3B-203ENST00000478840 SUPT3HB4E1H0 165 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 C12orf77C9JDV5 145 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 GOLGA8TH3BQL2 631 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 EIF3HO15372 352 aaKnown RBP eCLIP3.73□□□□□ -1.81
UPF3B-203ENST00000478840 ALDOBP05062 364 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 ANXA5P08758 320 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 GSTM3P21266 225 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 OR1G1P47890 313 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 UGT2B15P54855 530 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 SELENBP1Q13228 472 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 SLC25A30Q5SVS4 291 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 REEP3Q6NUK4 255 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 RFLNAQ6ZTI6 216 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 ZNF100Q8IYN0 542 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 MICU2Q8IYU8 434 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 OR2G2Q8NGZ5 317 aa3.73□□□□□ -1.81
UPF3B-203ENST00000478840 ZNF75CPQ92670 426 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms