RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CELSR1Q9NYQ6 3014 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 MAP1AP78559 2803 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-206ENST00000478214 CADP27708 2225 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 RNF13O43567 381 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 PIP5K1CO60331 668 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 GMNNO75496 209 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 HIST1H2ABP04908 130 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 HSD17B1P14061 328 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 FUT1P19526 365 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 IFNA8P32881 189 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 MNAT1P51948 309 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 ZP4Q12836 540 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 PHYHD1Q5SRE7 291 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 HIST3H2AQ7L7L0 130 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 NANOGNBQ7Z5D8 188 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 OFCC1Q8IZS5 231 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 GPR137CQ8N3F9 429 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 C17orf78Q8N4C9 275 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 FAM86B1Q8N7N1 296 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 OR1K1Q8NGR3 316 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 LILRB1Q8NHL6 650 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-206ENST00000478214 AKAP1Q92667 903 aaKnown RBP eCLIP13.66□□□□□ -0.22
HMGA1-206ENST00000478214 NEUROG1Q92886 237 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 HIST1H2ACQ93077 130 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 ZNF837Q96EG3 531 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-206ENST00000478214 NSL1Q96IY1 281 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 FNDC11Q9BVV2 318 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 GPR35Q9HC97 309 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 DCAF13Q9NV06 445 aaKnown RBP13.66□□□□□ -0.22
HMGA1-206ENST00000478214 NDE1Q9NXR1 346 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 AMDHD2Q9Y303 409 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 MED31Q9Y3C7 131 aa13.66□□□□□ -0.22
HMGA1-206ENST00000478214 PRRC2AP48634 2157 aaKnown RBP13.65□□□□□ -0.22
HMGA1-206ENST00000478214 ZNF726A6NNF4 738 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 B2RBV5 119 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 BLOC1S5-TXNDC5H3BN57 136 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 RPL36A-HNRNPH2H7BZ11 118 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 M0R3G1 203 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 HS3ST1O14792 307 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 PRSS23O95084 383 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 IGF2P01344 180 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 IFNGR1P15260 489 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 HOXC12P31275 282 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 ARF1P84077 181 aaKnown RBP13.65□□□□□ -0.22
HMGA1-206ENST00000478214 CAMK2DQ13557 499 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 TRAM2Q15035 370 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 FXNQ16595 210 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 CEACAM16Q2WEN9 425 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 TBRG1Q3YBR2 411 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 ADAM5Q6NVV9 412 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 C20orf204Q6ZNR8 217 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 SLC35D2Q76EJ3 337 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 ANKK1Q8NFD2 765 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 KBTBD8Q8NFY9 601 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 BCL2L2Q92843 193 aaPredicted RBP13.65□□□□□ -0.22
HMGA1-206ENST00000478214 BOD1Q96IK1 185 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 CXXC4Q9H2H0 198 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 NELFAQ9H3P2 528 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 GORASP2Q9H8Y8 452 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 CRLF2Q9HC73 371 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 ENPP4Q9Y6X5 453 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 V9GYQ6 96 aa13.65□□□□□ -0.22
HMGA1-206ENST00000478214 VPS13CQ709C8 3753 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 A0A096LPE4 126 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 A0A1W2PPZ6 126 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 M0R1B8 84 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 ABCD4O14678 606 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 ARPC2O15144 300 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 AQP2P41181 271 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 SH3BGRP55822 239 aaPredicted RBP13.64□□□□□ -0.23
HMGA1-206ENST00000478214 BIDP55957 195 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 PRPS1P60891 318 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 RPL18Q07020 188 aaKnown RBP13.64□□□□□ -0.23
HMGA1-206ENST00000478214 MELKQ14680 651 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 KLHL17Q6TDP4 642 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 KLHL24Q6TFL4 600 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 TMEM108Q6UXF1 575 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 SPNS3Q6ZMD2 512 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 MEX3DQ86XN8 651 aaKnown RBP13.64□□□□□ -0.23
HMGA1-206ENST00000478214 C7orf34Q96L11 122 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 ALPK1Q96QP1 1244 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 CCL19Q99731 98 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 MAGEL2Q9UJ55 1249 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 SAMD4AQ9UPU9 718 aaKnown RBP13.64□□□□□ -0.23
HMGA1-206ENST00000478214 HIVEP1P15822 2718 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 F8P00451 2351 aa13.64□□□□□ -0.23
HMGA1-206ENST00000478214 A0A087WUU8 490 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 SHISA9B4DS77 424 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 SEC14L2O76054 403 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 F13BP05160 661 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 T-ENOLP0DO92 83 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 IFI30P13284 250 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 PTAFRP25105 342 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 CD40P25942 277 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 CSNK1A1P48729 337 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 TUBA1BP68363 451 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 TUBA4AP68366 448 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 SPOCK1Q08629 439 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms