RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 OPALINQ96PE5 141 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CYTH2Q99418 400 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ACBD6Q9BR61 282 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 FRMD8P1Q9BZ68 369 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 RAB1BQ9H0U4 201 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 PARVGQ9HBI0 331 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 IL26Q9NPH9 171 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TIGARQ9NQ88 270 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 NRBP2Q9NSY0 501 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ABCD2Q9UBJ2 740 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 PRODH2Q9UF12 536 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 MLXQ9UH92 298 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 GGA2Q9UJY4 613 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ERVW-1Q9UQF0 538 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 MRPS28Q9Y2Q9 187 aaKnown RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ZFYVE16Q7Z3T8 1539 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 C9orf84Q5VXU9 1444 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CTTNBP2Q8WZ74 1663 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 PRSS37A4D1T9 235 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SLCO1B7G3V0H7 640 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 GFYI3L273 518 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 GPAA1O43292 621 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SLC19A2O60779 497 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 LYPD3O95274 346 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 HLA-HP01893 362 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 C2P06681 752 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 RBMY1CP0DJD4 496 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 PRPS2P11908 318 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 HMGCLP35914 325 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CFHR2P36980 270 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 GPM6AP51674 278 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ARHGDIBP52566 201 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CRISP1P54107 249 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ATP5J2P56134 94 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 MRPS11P82912 194 aaKnown RBP3.42□□□□□ -1.86
VPS13D-207ENST00000476169 LRRC63Q05C16 580 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ART3Q13508 389 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SF3A2Q15428 464 aaKnown RBP3.42□□□□□ -1.86
VPS13D-207ENST00000476169 TSC22D1Q15714 1073 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 DGUOKQ16854 277 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 C6orf89Q6UWU4 347 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 FRA10AC1Q70Z53 315 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 COPS6Q7L5N1 327 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 HDDC2Q7Z4H3 204 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 NR2C2APQ86WQ0 139 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CATSPER3Q86XQ3 398 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ERO1BQ86YB8 467 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 LRRC8AQ8IWT6 810 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SLC39A11Q8N1S5 342 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 AQP11Q8NBQ7 271 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 OR10H4Q8NGA5 316 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 OR1S2Q8NGQ3 325 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 OR56B4Q8NH76 319 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 C11orf45Q8TAV5 145 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ADAMTS16Q8TE57 1224 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CACNG8Q8WXS5 425 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 PSMG2Q969U7 264 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ISOC2Q96AB3 205 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CCDC124Q96CT7 223 aaKnown RBP3.42□□□□□ -1.86
VPS13D-207ENST00000476169 C9orf85Q96MD7 179 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 OXGR1Q96P68 337 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 OR8B4Q96RC9 309 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 LGMNQ99538 433 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 TM2D1Q9BX74 207 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 HCAR1Q9BXC0 346 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 NMUR2Q9GZQ4 415 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 GBA3Q9H227 469 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 GOLPH3Q9H4A6 298 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CAB39LQ9H9S4 337 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 TMEM165Q9HC07 324 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 CSNK1G1Q9HCP0 422 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF302Q9NR11 478 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 AGPAT4Q9NRZ5 378 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF275Q9NSD4 429 aaPredicted RBP3.42□□□□□ -1.86
VPS13D-207ENST00000476169 PLCXD1Q9NUJ7 323 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF446Q9NWS9 450 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ADA2Q9NZK5 511 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ADAM22Q9P0K1 906 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SAMD4AQ9UPU9 718 aaKnown RBP3.42□□□□□ -1.86
VPS13D-207ENST00000476169 PLLPQ9Y342 182 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SAR1BQ9Y6B6 198 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ABCC1P33527 1531 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 SYCP2Q9BX26 1530 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 MYOM3Q5VTT5 1437 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 UBN2Q6ZU65 1347 aa3.42□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF518AQ6AHZ1 1483 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 MAGI2Q86UL8 1455 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 ZMYM4Q5VZL5 1548 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 EHBP1L1Q8N3D4 1523 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 IQCF5A8MTL0 148 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF99A8MXY4 864 aaPredicted RBP3.41□□□□□ -1.86
VPS13D-207ENST00000476169 B4DXG7 233 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 CDC7O00311 574 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 SCAMP2O15127 329 aaKnown RBP3.41□□□□□ -1.86
VPS13D-207ENST00000476169 MBTPS2O43462 519 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 GPX5O75715 221 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 PIGRP01833 764 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 S100A6P06703 90 aa3.41□□□□□ -1.86
VPS13D-207ENST00000476169 PATE4P0C8F1 98 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms