RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 MFSD13AQ14CX5 517 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 NANOGP8Q6NSW7 305 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF613Q6PF04 617 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 RANBP3LQ86VV4 465 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-209ENST00000474432 OR10A6Q8NH74 314 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 RNF217Q8TC41 542 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 EPYCQ99645 322 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 RHNO1Q9BSD3 238 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 TMEM120AQ9BXJ8 343 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 NANOGQ9H9S0 305 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 MED29Q9NX70 200 aa16.13■□□□□ 0.17
COL7A1-209ENST00000474432 CHP2O43745 196 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 CD5LO43866 347 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 SEC14L2O76054 403 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 CBR1P16152 277 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 PAX7P23759 505 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 POU3F1Q03052 451 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-209ENST00000474432 ADIPOQQ15848 244 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 ENTPD8Q5MY95 495 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 CCDC80Q76M96 950 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 CALHM3Q86XJ0 350 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 UEVLDQ8IX04 471 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 GPR137CQ8N3F9 429 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 PIK3C3Q8NEB9 887 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 FBXO17Q96EF6 278 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF75AQ96N20 296 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF426Q9BUY5 554 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 PCDHAC1Q9H158 963 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 NOX3Q9HBY0 568 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 CA10Q9NS85 328 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 ARGLU1Q9NWB6 273 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-209ENST00000474432 B3GNT2Q9NY97 397 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 SLC13A4Q9UKG4 626 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 ATRQ13535 2644 aa16.12■□□□□ 0.17
COL7A1-209ENST00000474432 SLC35F4A4IF30 521 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 CPSF4LA6NMK7 179 aaKnown RBP16.11■□□□□ 0.17
COL7A1-209ENST00000474432 M0R3G1 203 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 CRYAAP02489 173 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 NQO1P15559 274 aaKnown RBP16.11■□□□□ 0.17
COL7A1-209ENST00000474432 EFNA4P52798 201 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 DSCR9P59020 149 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 CHRNB3Q05901 458 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 PUDPQ08623 228 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 PMS2P3Q13401 168 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 VMACQ2NL98 169 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 RABL3Q5HYI8 236 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 CARD17Q5XLA6 110 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF627Q7L945 461 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 PATL1Q86TB9 770 aaKnown RBP16.11■□□□□ 0.17
COL7A1-209ENST00000474432 ADAMTS16Q8TE57 1224 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 C10orf105Q8TEF2 133 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 LRR1Q96L50 414 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 SORCS2Q96PQ0 1159 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 PRSS27Q9BQR3 290 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 ASPNQ9BXN1 380 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF446Q9NWS9 450 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 SELENONQ9NZV5 590 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 NOX1Q9Y5S8 564 aa16.11■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF99A8MXY4 864 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-209ENST00000474432 F12P00748 615 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-209ENST00000474432 SERPINF1P36955 418 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 IL1RL1Q01638 556 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 LOXL1Q08397 574 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF74Q16587 644 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 TRMT5Q32P41 509 aaKnown RBP16.1■□□□□ 0.17
COL7A1-209ENST00000474432 CLEC2AQ6UVW9 174 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 PXKQ7Z7A4 578 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 MDP1Q86V88 176 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 SLC30A8Q8IWU4 369 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 VANGL1Q8TAA9 524 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-209ENST00000474432 MDFIQ99750 246 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 SAR1AQ9NR31 198 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 TAS2R5Q9NYW4 299 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 ZNF224Q9NZL3 707 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 PMF1-BGLAPU3KQ54 211 aa16.1■□□□□ 0.17
COL7A1-209ENST00000474432 IGHV2OR16-5A0A0B4J2B6 119 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 VWC2LB2RUY7 222 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 TLX2O43763 284 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-209ENST00000474432 AKAP8O43823 692 aaKnown RBP16.09■□□□□ 0.17
COL7A1-209ENST00000474432 MT-ATP6P00846 226 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 IGFBP1P08833 259 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-209ENST00000474432 IDH3GP51553 393 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-209ENST00000474432 KLF10Q13118 480 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 CAMK2DQ13557 499 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 EFNB3Q15768 340 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 LRRC17Q8N6Y2 441 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 NUP37Q8NFH4 326 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 OR5J2Q8NH18 312 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 LRRC58Q96CX6 371 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 TNFRSF13CQ96RJ3 184 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 PLK3Q9H4B4 646 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 SLC7A7Q9UM01 511 aa16.09■□□□□ 0.17
COL7A1-209ENST00000474432 FBN1P35555 2871 aaKnown RBP16.09■□□□□ 0.17
COL7A1-209ENST00000474432 COL6A5A8TX70 2615 aa16.08■□□□□ 0.17
COL7A1-209ENST00000474432 TMEM129A0AVI4 362 aa16.08■□□□□ 0.16
COL7A1-209ENST00000474432 TRAPPC13A5PLN9 417 aa16.08■□□□□ 0.16
COL7A1-209ENST00000474432 PDE5AO76074 875 aa16.08■□□□□ 0.16
COL7A1-209ENST00000474432 HLA-HP01893 362 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms