RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ZNF426Q9BUY5 554 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 OBP2BQ9NPH6 170 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 CMTM6Q9NX76 183 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 BAG5Q9UL15 447 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 CSPG4Q6UVK1 2322 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 ARPC4-TTLL3A0A0A6YYG9 625 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 IGHV1-18A0A0C4DH31 117 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 SLC35F4A4IF30 521 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 SMAD7O15105 426 aaKnown RBP15.65■□□□□ 0.1
UPF3A-203ENST00000474056 NDUFS7O75251 213 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 CH25HO95992 272 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 TTKP33981 857 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 SH3BGRP55822 239 aaPredicted RBP15.65■□□□□ 0.1
UPF3A-203ENST00000474056 UBE2NP61088 152 aaKnown RBP15.65■□□□□ 0.1
UPF3A-203ENST00000474056 ARF1P84077 181 aaKnown RBP15.65■□□□□ 0.1
UPF3A-203ENST00000474056 ZNF74Q16587 644 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 C1QTNF12Q5T7M4 302 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 ANKRD16Q6P6B7 361 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 DEPDC4Q8N2C3 294 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 MAGEE2Q8TD90 523 aaPredicted RBP15.65■□□□□ 0.1
UPF3A-203ENST00000474056 MPP4Q96JB8 637 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 GRIP2Q9C0E4 1043 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 CRLF2Q9HC73 371 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 NOX1Q9Y5S8 564 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 ATP23Q9Y6H3 246 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 TLN2Q9Y4G6 2542 aa15.65■□□□□ 0.1
UPF3A-203ENST00000474056 ELOVL7A1L3X0 281 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 ATP6V1G2-DDX39BF2Z307 99 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 M0R3G1 203 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 CCDC22O60826 627 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 SEC14L2O76054 403 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 IGHV4-39P01824 125 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 ADORA3P0DMS8 318 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 KDELR2P33947 212 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 OR1E2P47887 323 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 FABP6P51161 128 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 SEC24CP53992 1094 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 CHD3Q12873 2000 aaKnown RBP15.64■□□□□ 0.09
UPF3A-203ENST00000474056 CAMK2DQ13557 499 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 CYBRD1Q53TN4 286 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 AGAP6Q5VW22 663 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 C11orf71Q6IPW1 123 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 Q71RC1 249 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-203ENST00000474056 SLC46A3Q7Z3Q1 461 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 PXKQ7Z7A4 578 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 NKAIN4Q8IVV8 208 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 SLC15A3Q8IY34 581 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 C20orf196Q8IYI0 205 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 MUC15Q8N387 334 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 LRRC17Q8N6Y2 441 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 ANKK1Q8NFD2 765 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 SLC38A2Q96QD8 506 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 ELAC2Q9BQ52 826 aaKnown RBP15.64■□□□□ 0.09
UPF3A-203ENST00000474056 FKRPQ9H9S5 495 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 MEPEQ9NQ76 525 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-203ENST00000474056 GDF2Q9UK05 429 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-203ENST00000474056 MOKQ9UQ07 419 aa15.64■□□□□ 0.09
UPF3A-203ENST00000474056 ZNF503-AS2A6NEH8 195 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 IFNA14P01570 189 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 UGT2B15P54855 530 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 TAS2R41P59536 307 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 PIN1Q13526 163 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-203ENST00000474056 CLEC12BQ2HXU8 276 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 SPATA21Q7Z572 469 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 ARPINQ7Z6K5 226 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 FBXL14Q8N1E6 418 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 PFN4Q8NHR9 129 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 TMEM255BQ8WV15 326 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 TPD52L3Q96J77 140 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 LRR1Q96L50 414 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 CACNG6Q9BXT2 260 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 SLC19A3Q9BZV2 496 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 SEC61A2Q9H9S3 476 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 NANSQ9NR45 359 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 CBLN4Q9NTU7 201 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 TAS2R5Q9NYW4 299 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 CRNNQ9UBG3 495 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-203ENST00000474056 NAV3Q8IVL0 2385 aa15.63■□□□□ 0.09
UPF3A-203ENST00000474056 ZNF99A8MXY4 864 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-203ENST00000474056 NME4O00746 187 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 OR5F1O95221 314 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 OR6A2O95222 327 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 ASAH2BP0C7U1 165 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 CECR9P0C854 216 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 UMPSP11172 480 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 HOXB1P14653 301 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-203ENST00000474056 IFNGR1P15260 489 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 ACVR1BP36896 505 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 BIDP55957 195 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 LIPEQ05469 1076 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 ZP4Q12836 540 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 TNK1Q13470 666 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 ZNF544Q6NX49 715 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 C8orf82Q6P1X6 216 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-203ENST00000474056 CLEC9AQ6UXN8 241 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 MYPOPQ86VE0 399 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-203ENST00000474056 POLR2J2Q9GZM3 115 aaKnown RBP15.62■□□□□ 0.09
UPF3A-203ENST00000474056 FAM107BQ9H098 131 aa15.62■□□□□ 0.09
UPF3A-203ENST00000474056 POLR2J3Q9H1A7 115 aaKnown RBP15.62■□□□□ 0.09
UPF3A-203ENST00000474056 ZNF229Q9UJW7 825 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms