RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SLC25A15Q9Y619 301 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 SLC35F4A4IF30 521 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 DPRXA6NFQ7 191 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 HS3ST1O14792 307 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 SMPD2O60906 423 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 OR7A10O76100 309 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 ZNF432O94892 652 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 IFNGR1P15260 489 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 CD53P19397 219 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 UGT2B15P54855 530 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 SH3BGRP55822 239 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-203ENST00000474047 CAMK2DQ13557 499 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 TRAM2Q15035 370 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 HIKESHIQ53FT3 197 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 OR1K1Q8NGR3 316 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 MBD6Q96DN6 1003 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 ALPK1Q96QP1 1244 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 GPR35Q9HC97 309 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-203ENST00000474047 POU2F3Q9UKI9 436 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 A4GNTQ9UNA3 340 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 SNX13Q9Y5W8 968 aa12.48□□□□□ -0.41
VAMP4-203ENST00000474047 B2RBV5 119 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 J3KTA2 159 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 ABCD4O14678 606 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 HSD17B1P14061 328 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 PTAFRP25105 342 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 BIDP55957 195 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 ZP4Q12836 540 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 C1QTNF12Q5T7M4 302 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 SLC35D2Q76EJ3 337 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 CDK20Q8IZL9 346 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 WDR31Q8NA23 367 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
VAMP4-203ENST00000474047 TAS2R5Q9NYW4 299 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 NPAP1Q9NZP6 1156 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 MAGEL2Q9UJ55 1249 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 MGAT4BQ9UQ53 548 aa12.47□□□□□ -0.41
VAMP4-203ENST00000474047 A0A096LPE4 126 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 A0A1W2PPZ6 126 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 A0A1W2PRG6 482 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 MCIDASD6RGH6 385 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 BCL10O95999 233 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 ASAH2BP0C7U1 165 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 IFI30P13284 250 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 ARF1P84077 181 aaKnown RBP12.46□□□□□ -0.41
VAMP4-203ENST00000474047 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 ZNF730Q6ZMV8 503 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 LINGO2Q7L985 606 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 SLC46A3Q7Z3Q1 461 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 OFCC1Q8IZS5 231 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 TMEM123Q8N131 208 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 FBXW5Q969U6 566 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 RADILQ96JH8 1075 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 LRR1Q96L50 414 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 ADAD1Q96M93 576 aaKnown RBP12.46□□□□□ -0.41
VAMP4-203ENST00000474047 KCNS3Q9BQ31 491 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 ULBP2Q9BZM5 246 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 OBP2BQ9NPH6 170 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 C20orf141Q9NUB4 165 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 POFUT2Q9Y2G5 429 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 ENPP4Q9Y6X5 453 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 V9GYQ6 96 aa12.46□□□□□ -0.41
VAMP4-203ENST00000474047 HRNRQ86YZ3 2850 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-203ENST00000474047 HTR3EA5X5Y0 456 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 RPL36A-HNRNPH2H7BZ11 118 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 SAGP10523 405 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 PAX7P23759 505 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 CAPZA2P47755 286 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 CSNK1A1P48729 337 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 SEZ6L2Q6UXD5 910 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF611Q8N823 705 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 RBM15BQ8NDT2 890 aaKnown RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 KBTBD8Q8NFY9 601 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 BCL2L2Q92843 193 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 BPIFA2Q96DR5 249 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 NSMCE2Q96MF7 247 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 INIPQ9NRY2 104 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 FAM53CQ9NYF3 392 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 DSCAMO60469 2012 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 PIP5K1CO60331 668 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 IGF2P01344 180 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 F13BP05160 661 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 ITGA2P17301 1181 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 CALB2P22676 271 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 CD40P25942 277 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms