RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 EDNRAP25101 427 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 PYCR1P32322 319 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ACAA2P42765 397 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 NR4A2P43354 598 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 FNTBP49356 437 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 DIO1P49895 249 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 NXPH1P58417 271 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 BTG2P78543 158 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 MRPS15P82914 257 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 MAT1AQ00266 395 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TFF2Q03403 129 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 CSTF1Q05048 431 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SLC3A1Q07837 685 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 PLCXD2Q0VAA5 305 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 RIN1Q13671 783 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 GGTLC2Q14390 218 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 HSPB2Q16082 182 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 NNATQ16517 81 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 DEFB133Q30KQ1 61 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 GLYR1Q49A26 553 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ZFP69Q49AA0 526 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 KIRREL2Q6UWL6 708 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 WDR88Q6ZMY6 472 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 MED25Q71SY5 747 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 Q7L0L9 218 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 NRARPQ7Z6K4 114 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 MISPQ8IVT2 679 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 UBQLNLQ8IYU4 475 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SPEM1Q8N4L4 309 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ARIH2OSQ8N7S6 290 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TMEM99Q8N816 258 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SCAIQ8N9R8 606 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TEX19Q8NA77 164 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 CYB561A3Q8NBI2 242 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SIMC1Q8NDZ2 872 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SDR9C7Q8NEX9 313 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 OR5M3Q8NGP4 307 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 OR6K6Q8NGW6 343 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 OR2T4Q8NH00 348 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 OR4K13Q8NH42 304 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ZNF671Q8TAW3 534 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 RLN3Q8WXF3 142 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 THAP4Q8WY91 577 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 RFT1Q96AA3 541 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 CLIP3Q96DZ5 547 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TRMT61AQ96FX7 289 aaKnown RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SENP5Q96HI0 755 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 GAL3ST4Q96RP7 486 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ATF6BQ99941 703 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TBL1XR1Q9BZK7 514 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 OR2B2Q9GZK3 357 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 LAT2Q9GZY6 243 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TMPRSS5Q9H3S3 457 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 UBE2ZQ9H832 354 aaPredicted RBP5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 RNF121Q9H920 327 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 MED20Q9H944 212 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 SEC61A2Q9H9S3 476 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 MCCC2Q9HCC0 563 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ZNF304Q9HCX3 659 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 NANSQ9NR45 359 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 RXFP3Q9NSD7 469 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 FBXO34Q9NWN3 711 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ING3Q9NXR8 418 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 FLRT3Q9NZU0 649 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 ABRACLQ9P1F3 81 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 LRIT1Q9P2V4 623 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 EXTL2Q9UBQ6 330 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 GRHPRQ9UBQ7 328 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 CHRNA9Q9UGM1 479 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 KCNE5Q9UJ90 142 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 GNG8Q9UK08 70 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 IER3IP1Q9Y5U9 82 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TMEM14AQ9Y6G1 99 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 CCDC88CQ9P219 2028 aa5.35□□□□□ -1.55
ATPAF1-204ENST00000474020 TRAV1-2A0A0B4J238 106 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TRBV2A0A0J9YWF9 115 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 A0A1B0GX78 115 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 A0A1W2PPC1 479 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 ANKRD61A6NGH8 418 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 HMX3A6NHT5 357 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 PATE3B3GLJ2 98 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 NPIPB9F8W1W9 429 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 BLOC1S5-TXNDC5H3BN57 136 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 J3QRE1 110 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 BCAT2O15382 392 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 TOX3O15405 576 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 LYRM1O43325 122 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 HCRTR1O43613 425 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 HCRTR2O43614 444 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CDC40O60508 579 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 HPGDSO60760 199 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 SERPINI2O75830 405 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 GLCEO94923 617 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CNOT4O95628 575 aaKnown RBP5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 NTN1O95631 604 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 MT-ATP6P00846 226 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CD14P08571 375 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CSF3P09919 207 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CT45A8P0DMV1 189 aa5.34□□□□□ -1.55
ATPAF1-204ENST00000474020 CT45A9P0DMV2 189 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms