RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ARR3P36575 388 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 ETV4P43268 484 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 EVX1P49640 407 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 UFM1P61960 85 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 IL13RA1P78552 427 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 PIGFQ07326 219 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 HNRNPA0Q13151 305 aaKnown RBP7.97□□□□□ -1.13
VCL-204ENST00000472585 CHI3L2Q15782 390 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 FXNQ16595 210 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 SMU1Q2TAY7 513 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 MS4A18Q3C1V0 323 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 ZNF311Q5JNZ3 666 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 WBP2NLQ6ICG8 309 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 C1QL2Q7Z5L3 287 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 SERPINA11Q86U17 422 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 COMTD1Q86VU5 262 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 CNPY4Q8N129 248 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 RIBC1Q8N443 379 aaPredicted RBP7.97□□□□□ -1.13
VCL-204ENST00000472585 ZNF781Q8N8C0 355 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 MFSD8Q8NHS3 518 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 UBLCP1Q8WVY7 318 aaPredicted RBP7.97□□□□□ -1.13
VCL-204ENST00000472585 RDH5Q92781 318 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 TAF15Q92804 592 aaKnown RBP eCLIP7.97□□□□□ -1.13
VCL-204ENST00000472585 TAAR8Q969N4 342 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 SLC25A36Q96CQ1 311 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 OR2M2Q96R28 347 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 DPY30Q9C005 99 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 OPN4Q9UHM6 478 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 MID2Q9UJV3 735 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 RASD1Q9Y272 281 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 CMAHPQ9Y471 501 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 DSPPQ9NZW4 1301 aa7.97□□□□□ -1.13
VCL-204ENST00000472585 IGKV1D-42A0A075B6H8 117 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 A0A0G2JMP0 313 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 A0A0X1KG70 313 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 TLDC2A0PJX2 215 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 PLPP2O43688 288 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 TRAF3IP2O43734 574 aaPredicted RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 ZNF500O60304 480 aaPredicted RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 CLPTM1O96005 669 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 DBIP07108 87 aaKnown RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 ALDOCP09972 364 aaKnown RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 PATE4P0C8F1 98 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 ACHEP22303 614 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 CHI3L1P36222 383 aaPredicted RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 RBMXP38159 391 aaKnown RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 MAGEB1P43366 347 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 RPS5P46782 204 aaKnown RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 SH3BGRP55822 239 aaPredicted RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 NME5P56597 212 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 TMEM33P57088 247 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 MYBPC1Q00872 1141 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 OCLNQ16625 522 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 ALKBH6Q3KRA9 238 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 SLC9B1Q4ZJI4 515 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 RPS26P11Q5JNZ5 115 aaPredicted RBP7.96□□□□□ -1.14
VCL-204ENST00000472585 AVPI1Q5T686 147 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 ANXA8L1Q5VT79 327 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 ZNF584Q8IVC4 421 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 OR4M2Q8NGB6 313 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 OR52P1PQ8NH57 321 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 C22orf15Q8WYQ4 148 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 TXNDC15Q96J42 360 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 PKNOX2Q96KN3 472 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 OXGR1Q96P68 337 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 TSPAN32Q96QS1 320 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 SORT1Q99523 831 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 PKP2Q99959 881 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 EMC6Q9BV81 110 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 TAPBPLQ9BX59 468 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 SLITRK2Q9H156 845 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 BTNL2Q9UIR0 455 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 RCE1Q9Y256 329 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 CORINQ9Y5Q5 1042 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 CMYA5Q8N3K9 4069 aa7.96□□□□□ -1.14
VCL-204ENST00000472585 ZNF99A8MXY4 864 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 M0R082 166 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 M0R233 179 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 M0R3G1 203 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 PPIHO43447 177 aaKnown RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 TYROBPO43914 113 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 CDC14BO60729 498 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 SLC43A1O75387 559 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 FSHBP01225 129 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 NUDT17P0C025 328 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 NR2F1P10589 423 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ETFAP13804 333 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ZNF43P17038 809 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 CBLP22681 906 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 PRTN3P24158 256 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 S100A3P33764 101 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 GLRXP35754 106 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 CAPZA2P47755 286 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 GIPRP48546 466 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 MAD2L1Q13257 205 aaPredicted RBP7.95□□□□□ -1.14
VCL-204ENST00000472585 CARD17Q5XLA6 110 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ATG16L1Q676U5 607 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 REP15Q6BDI9 236 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ACSM5Q6NUN0 579 aa7.95□□□□□ -1.14
VCL-204ENST00000472585 ZNF621Q6ZSS3 439 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms