RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 MED31Q9Y3C7 131 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 FREM1Q5H8C1 2179 aa8.02□□□□□ -1.13
SYN3-211ENST00000472027 A0A096LPE4 126 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 A0A1W2PPZ6 126 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 SHISA9B4DS77 424 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 BLOC1S5-TXNDC5H3BN57 136 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 M0R3G1 203 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 ABCD4O14678 606 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 FFAR1O14842 300 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 RNF13O43567 381 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 SMPD2O60906 423 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 GMNNO75496 209 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 OR7A10O76100 309 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 WNT11O96014 354 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 IGF2P01344 180 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 IFNGR1P15260 489 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 TCN1P20061 433 aaPredicted RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 CD40P25942 277 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 BIDP55957 195 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 UBE2NP61088 152 aaKnown RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 ADAM8P78325 824 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 NKX6-1P78426 367 aaPredicted RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 LSM11P83369 360 aaKnown RBP eCLIP8.01□□□□□ -1.13
SYN3-211ENST00000472027 ARF1P84077 181 aaKnown RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 CAMK2DQ13557 499 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 KRT72Q14CN4 511 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 TRAM2Q15035 370 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 CEACAM16Q2WEN9 425 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 TBRG1Q3YBR2 411 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 ZNF672Q499Z4 452 aaPredicted RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 ANKRD16Q6P6B7 361 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 KLHL24Q6TFL4 600 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 SLC35D2Q76EJ3 337 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 TSEN54Q7Z6J9 526 aaKnown RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 FAM156AQ8NDB6 213 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 RBM15BQ8NDT2 890 aaKnown RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 KBTBD8Q8NFY9 601 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 MAGEE2Q8TD90 523 aaPredicted RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 LIPHQ8WWY8 451 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 IGFBPL1Q8WX77 278 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 FBXW5Q969U6 566 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 SGTBQ96EQ0 304 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 RADILQ96JH8 1075 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 HSH2DQ96JZ2 352 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 FNDC11Q9BVV2 318 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 GORASP2Q9H8Y8 452 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 CRLF2Q9HC73 371 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 DCAF13Q9NV06 445 aaKnown RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 CISD1Q9NZ45 108 aaKnown RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 CD300AQ9UGN4 299 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 RPS6KA6Q9UK32 745 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 ADAM21Q9UKJ8 722 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 MGAT4BQ9UQ53 548 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 MAGED1Q9Y5V3 778 aaPredicted RBP8.01□□□□□ -1.13
SYN3-211ENST00000472027 AKAP9Q99996 3911 aa8.01□□□□□ -1.13
SYN3-211ENST00000472027 NOTCH2Q04721 2471 aa8□□□□□ -1.13
SYN3-211ENST00000472027 ARPC4-TTLL3A0A0A6YYG9 625 aa8□□□□□ -1.13
SYN3-211ENST00000472027 B2RBV5 119 aa8□□□□□ -1.13
SYN3-211ENST00000472027 PRSS23O95084 383 aa8□□□□□ -1.13
SYN3-211ENST00000472027 F13BP05160 661 aa8□□□□□ -1.13
SYN3-211ENST00000472027 DANCRP0C864 163 aa8□□□□□ -1.13
SYN3-211ENST00000472027 IFI30P13284 250 aa8□□□□□ -1.13
SYN3-211ENST00000472027 HSD17B1P14061 328 aa8□□□□□ -1.13
SYN3-211ENST00000472027 HOXB1P14653 301 aaPredicted RBP8□□□□□ -1.13
SYN3-211ENST00000472027 PAX7P23759 505 aa8□□□□□ -1.13
SYN3-211ENST00000472027 MSX2P35548 267 aaPredicted RBP8□□□□□ -1.13
SYN3-211ENST00000472027 AQP2P41181 271 aa8□□□□□ -1.13
SYN3-211ENST00000472027 SH3BGRP55822 239 aaPredicted RBP8□□□□□ -1.13
SYN3-211ENST00000472027 MXRA7P84157 204 aa8□□□□□ -1.13
SYN3-211ENST00000472027 RPL18Q07020 188 aaKnown RBP8□□□□□ -1.13
SYN3-211ENST00000472027 SPOCK1Q08629 439 aa8□□□□□ -1.13
SYN3-211ENST00000472027 LAPTM4AQ15012 233 aa8□□□□□ -1.13
SYN3-211ENST00000472027 SLC22A25Q6T423 547 aa8□□□□□ -1.13
SYN3-211ENST00000472027 C16orf89Q6UX73 402 aa8□□□□□ -1.13
SYN3-211ENST00000472027 NANOGNBQ7Z5D8 188 aa8□□□□□ -1.13
SYN3-211ENST00000472027 TGIF2LYQ8IUE0 185 aa8□□□□□ -1.13
SYN3-211ENST00000472027 DEFB107AQ8IZN7 70 aa8□□□□□ -1.13
SYN3-211ENST00000472027 OFCC1Q8IZS5 231 aa8□□□□□ -1.13
SYN3-211ENST00000472027 LRRC75A-AS1Q8N1F1 130 aa8□□□□□ -1.13
SYN3-211ENST00000472027 DEPDC4Q8N2C3 294 aa8□□□□□ -1.13
SYN3-211ENST00000472027 CCDC197Q8NCU1 140 aa8□□□□□ -1.13
SYN3-211ENST00000472027 OR6N1Q8NGY5 312 aa8□□□□□ -1.13
SYN3-211ENST00000472027 OR6X1Q8NH79 312 aa8□□□□□ -1.13
SYN3-211ENST00000472027 SMAP2Q8WU79 429 aaPredicted RBP8□□□□□ -1.13
SYN3-211ENST00000472027 TMEM171Q8WVE6 324 aa8□□□□□ -1.13
SYN3-211ENST00000472027 BPIFA2Q96DR5 249 aa8□□□□□ -1.13
SYN3-211ENST00000472027 NSL1Q96IY1 281 aa8□□□□□ -1.13
SYN3-211ENST00000472027 ADAD1Q96M93 576 aaKnown RBP8□□□□□ -1.13
SYN3-211ENST00000472027 NELFAQ9H3P2 528 aa8□□□□□ -1.13
SYN3-211ENST00000472027 OBP2BQ9NPH6 170 aa8□□□□□ -1.13
SYN3-211ENST00000472027 B3GAT2Q9NPZ5 323 aa8□□□□□ -1.13
SYN3-211ENST00000472027 MAN2C1Q9NTJ4 1040 aa8□□□□□ -1.13
SYN3-211ENST00000472027 NDE1Q9NXR1 346 aa8□□□□□ -1.13
SYN3-211ENST00000472027 SAMD4AQ9UPU9 718 aaKnown RBP8□□□□□ -1.13
SYN3-211ENST00000472027 LAMP3Q9UQV4 416 aa8□□□□□ -1.13
SYN3-211ENST00000472027 ENPP4Q9Y6X5 453 aa8□□□□□ -1.13
SYN3-211ENST00000472027 A0A087WUU8 490 aa7.99□□□□□ -1.13
SYN3-211ENST00000472027 IGHV1-18A0A0C4DH31 117 aa7.99□□□□□ -1.13
SYN3-211ENST00000472027 HTR3EA5X5Y0 456 aa7.99□□□□□ -1.13
SYN3-211ENST00000472027 ZNF99A8MXY4 864 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms