RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CCL27Q9Y4X3 112 aa5.85□□□□□ -1.47
HDAC1-204ENST00000471488 ARHGAP32A7KAX9 2087 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 TRAV40A0A0B4J280 105 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 A8MVM7 634 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF99A8MXY4 864 aaPredicted RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 NPIPB8E9PQR5 432 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 G3V4G9 280 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 FRS3O43559 492 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 AKAP8O43823 692 aaKnown RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 DNAJA2O60884 412 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 VAMP5O95183 116 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 FSHBP01225 129 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 IGHV4-38-2P0DP08 117 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 PNMTP11086 282 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 NQO1P15559 274 aaKnown RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 CCNOP22674 350 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 CRYBB2P43320 205 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 MRPS11P82912 194 aaKnown RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 POU3F1Q03052 451 aaPredicted RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF154Q13106 437 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 GNA13Q14344 377 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 TAF9Q16594 264 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 PCGF3Q3KNV8 242 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 KLF17Q5JT82 389 aaPredicted RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 SPATA46Q5T0L3 261 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 MRPL2Q5T653 305 aaKnown RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 IL23RQ5VWK5 629 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 OR4F3Q6IEY1 312 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 ZYG11AQ6WRX3 759 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 FRRS1Q6ZNA5 592 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 FAM169BQ8N8A8 192 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 FAM71CQ8NEG0 241 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 DEFB108BQ8NET1 73 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 OR6N1Q8NGY5 312 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 TWIST2Q8WVJ9 160 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 C11orf40Q8WZ69 217 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 TRIM44Q96DX7 344 aaPredicted RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 PPP1R36Q96LQ0 422 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 ULBP2Q9BZM5 246 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 LINC00470Q9BZP3 86 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 TUBB1Q9H4B7 451 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 B3GAT2Q9NPZ5 323 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 EXOSC3Q9NQT5 275 aaKnown RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 RLIMQ9NVW2 624 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 OR5V1Q9UGF6 321 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 EGFL7Q9UHF1 273 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 SLC7A8Q9UHI5 535 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 LEF1Q9UJU2 399 aaPredicted RBP5.84□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF180Q9UJW8 692 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 WNK2Q9Y3S1 2297 aa5.84□□□□□ -1.47
HDAC1-204ENST00000471488 A0A1B0GUS0 222 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PLSCR5A0PG75 271 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PRAMEF27A3QJZ7 478 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 AGAP5A6NIR3 686 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SLC22A31A6NKX4 558 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SMIM23A6NLE4 172 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 G3V2L1 256 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 TRAPPC2LH3BP13 241 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 H3BQF6 201 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PIP5K1CO60331 668 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 URI1O94763 535 aaPredicted RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 TGDSO95455 350 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 AGR2O95994 175 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 NR2F1P10589 423 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF35P13682 527 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF14P17017 642 aaPredicted RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PRPH2P23942 346 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF81P51508 661 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SEC61A1P61619 476 aaKnown RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ETF1P62495 437 aaKnown RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 GNB2P62879 340 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 EPS8Q12929 822 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 MFSD13AQ14CX5 517 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SYPL1Q16563 259 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PHYHD1Q5SRE7 291 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ASPHD2Q6ICH7 369 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 BRD3OSQ6XYD6 125 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 CCDC36Q8IYA8 594 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 KLHL36Q8N4N3 616 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 C10orf53Q8N6V4 93 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ANKFN1Q8N957 763 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SLC30A7Q8NEW0 376 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PNPT1Q8TCS8 783 aaKnown RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 GEMIN6Q8WXD5 167 aaKnown RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 ELMOD3Q96FG2 381 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 BOD1Q96IK1 185 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 METTL2AQ96IZ6 378 aaKnown RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 PPP3R2Q96LZ3 170 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 CITED1Q99966 193 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 GATA5Q9BWX5 397 aaPredicted RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 CACYBPQ9HB71 228 aaKnown RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SLCO1C1Q9NYB5 712 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 RPS6KB2Q9UBS0 482 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 MARCOQ9UEW3 520 aaPredicted RBP5.83□□□□□ -1.48
HDAC1-204ENST00000471488 RCE1Q9Y256 329 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 RNF114Q9Y508 228 aa5.83□□□□□ -1.48
HDAC1-204ENST00000471488 SLC22A23A1A5C7 686 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 CLPSL1A2RUU4 121 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF726A6NNF4 738 aa5.82□□□□□ -1.48
HDAC1-204ENST00000471488 RPL36A-HNRNPH2H7BZ11 118 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms