RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SLC17A4Q9Y2C5 497 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 OR1A2Q9Y585 309 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SPAG17Q6Q759 2223 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SDK1Q7Z5N4 2213 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 ANKRD12Q6UB98 2062 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 EML5Q05BV3 1969 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SPTY2D1-AS1A0A0U1RR47 76 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SLC5A10A0PJK1 596 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 OR2AG2A6NM03 316 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SYCE1LA8MT33 242 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 MEI4A8MW99 385 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 NPIPA3F8WFD2 350 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 GFYI3L273 518 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 K7EPI3 171 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 POLR3GO15318 223 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 PLIN3O60664 434 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SMPD2O60906 423 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TSPAN12O95859 305 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 MT-ATP6P00846 226 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TNFP01375 233 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 C8GP07360 202 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SBK2P0C263 348 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TPBGLP0DKB5 382 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 MPC1LP0DKB6 136 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CPA3P15088 417 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 AREGP15514 252 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CD1DP15813 335 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TAC1P20366 129 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 AHCYP23526 432 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 MDH1P40925 334 aaKnown RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 PI4KAP42356 2102 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SRP54P61011 504 aaKnown RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 NAA20P61599 178 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 LRRC74AQ0VAA2 488 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 HSPA14Q0VDF9 509 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ASPHQ12797 758 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TNK1Q13470 666 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TSTA3Q13630 321 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF658BQ4V348 819 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 PYCR3Q53H96 274 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 PRR30Q53SZ7 412 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ACSBG2Q5FVE4 666 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CDKL4Q5MAI5 379 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 N4BP2L1Q5TBK1 243 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CYHR1Q6ZMK1 362 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 GCNT7Q6ZNI0 430 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM182Q6ZP80 229 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ADAMTSL2Q86TH1 951 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TRAPPC5Q8IUR0 188 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF547Q8IVP9 402 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM105Q8N8V8 129 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 OCC1Q8TAD7 63 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 RAB3IL1Q8TBN0 382 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 KCTD4Q8WVF5 259 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ANKRD49Q8WVL7 239 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ELMO1Q92556 727 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 ST6GALNAC6Q969X2 333 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM159Q96B96 161 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CCDC126Q96EE4 140 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SELENOSQ9BQE4 189 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 TIMM29Q9BSF4 260 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 DPEP2Q9H4A9 486 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 FNDC4Q9H6D8 234 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-202ENST00000471307 RDH14Q9HBH5 336 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 DCAF16Q9NXF7 216 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SLCO1C1Q9NYB5 712 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SLC17A7Q9P2U7 560 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 SATB2Q9UPW6 733 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CLCA3PQ9Y6N3 262 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
CCDC39-202ENST00000471307 CACNA1EQ15878 2313 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 VCANP13611 3396 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 ZFC3H1O60293 1989 aaKnown RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CABIN1Q9Y6J0 2220 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PCM1Q15154 2024 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 TRGV8A0A0C4DH27 118 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 TLR4O00206 839 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 ZNF749O43361 778 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SELENOFO60613 162 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SMIM24O75264 130 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 PSIP1O75475 530 aaKnown RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 GLCEO94923 617 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 MT-ND1P03886 318 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 RPN2P04844 631 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 BPGMP07738 259 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 HIST1H2AGP0C0S8 130 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 SP9P0CG40 484 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 MYL2P10916 166 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 GNSP15586 552 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 RPS2P15880 293 aaKnown RBP4.13□□□□□ -1.75
CCDC39-202ENST00000471307 BCKDHBP21953 392 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 IDSP22304 550 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CAMLGP49069 296 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 GSK3BP49841 420 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 AP1S2P56377 157 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 DNAJB13P59910 316 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 CDKL1Q00532 357 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 GALK2Q01415 458 aa4.13□□□□□ -1.75
CCDC39-202ENST00000471307 ABRQ12979 859 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms