RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CHST2Q9Y4C5 530 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 SLC25A15Q9Y619 301 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 OR6C65A6NJZ3 312 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 C5orf58C9J3I9 102 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 H7C1Q1 480 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 NPIPB7O75200 414 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 DEAF1O75398 565 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 SOD3P08294 240 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 CDH2P19022 906 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 PRKAR1BP31321 381 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 LIPEQ05469 1076 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 OR7A5Q15622 319 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 GABRA6Q16445 453 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 NRF1Q16656 503 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 SLC36A3Q495N2 470 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 RPS26P11Q5JNZ5 115 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 TMEM225Q6GV28 225 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 C5orf46Q6UWT4 87 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 ATG4DQ86TL0 474 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 TMEM99Q8N816 258 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 KBTBD8Q8NFY9 601 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 OR9K2Q8NGE7 335 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 ZNF420Q8TAQ5 688 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 C3orf49Q96BT1 292 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 SMR3AQ99954 134 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 EVA1AQ9H8M9 152 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 SMPD3Q9NY59 655 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 SLC25A37Q9NYZ2 338 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 NPAP1Q9NZP6 1156 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 RSL24D1Q9UHA3 163 aaKnown RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 AMDHD2Q9Y303 409 aa11.87□□□□□ -0.51
HMGN1-211ENST00000471260 MAGED1Q9Y5V3 778 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-211ENST00000471260 EVPLLA8MZ36 301 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 TMEM229AB2RXF0 380 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 SHISA9B4DS77 424 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 SOCS2O14508 198 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 ABCD4O14678 606 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 GMNNO75496 209 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 PRSS23O95084 383 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 AKR7A3O95154 331 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 ITGA5P08648 1049 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 NUDT7P0C024 238 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 ARAFP10398 606 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 GPX2P18283 190 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 MPGP29372 298 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 CAPGP40121 348 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 CYP51A1Q16850 503 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 PGGHGQ32M88 737 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 TSPO2Q5TGU0 170 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 C1orf140Q5VVS0 124 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 REEP3Q6NUK4 255 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 PATL1Q86TB9 770 aaKnown RBP11.86□□□□□ -0.51
HMGN1-211ENST00000471260 SERPINA11Q86U17 422 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 DTX2Q86UW9 622 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 KRT73Q86Y46 540 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 ERI1Q8IV48 349 aaKnown RBP11.86□□□□□ -0.51
HMGN1-211ENST00000471260 DEPDC4Q8N2C3 294 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 CIARTQ8N365 385 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-211ENST00000471260 LSMEM1Q8N8F7 131 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 MFSD8Q8NHS3 518 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 MAL2Q969L2 176 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 MPP4Q96JB8 637 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 NSMCE2Q96MF7 247 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 SEMA6AQ9H2E6 1030 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 TMEM38AQ9H6F2 299 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 SLC7A10Q9NS82 523 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 RASD1Q9Y272 281 aa11.86□□□□□ -0.51
HMGN1-211ENST00000471260 TRBV5-3A0A0A0MS03 114 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 FRS3O43559 492 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 OR2T1O43869 369 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 AHSA1O95433 338 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 LY6G6DO95868 133 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 PRG2P13727 222 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 ATP6V1B1P15313 513 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 CD40P25942 277 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 P2RY4P51582 365 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 CDK6Q00534 326 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 PAGE3Q5JUK9 113 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 AGAP6Q5VW22 663 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 DHRS4L2Q6PKH6 230 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 AMIGO2Q86SJ2 522 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 GPAT4Q86UL3 456 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 MSRB3Q8IXL7 192 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 CBR4Q8N4T8 237 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 ZIC4Q8N9L1 334 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 OR52N5Q8NH56 324 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 DNAJA4Q8WW22 397 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-211ENST00000471260 NEUROG1Q92886 237 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 SLC29A1Q99808 456 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 TRAF4Q9BUZ4 470 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-211ENST00000471260 OSBPL10Q9BXB5 764 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 SLCO5A1Q9H2Y9 848 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 MAGIXQ9H6Y5 334 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 GORASP2Q9H8Y8 452 aa11.85□□□□□ -0.51
HMGN1-211ENST00000471260 BARX1Q9HBU1 254 aaPredicted RBP11.85□□□□□ -0.51
HMGN1-211ENST00000471260 OBP2BQ9NPH6 170 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms