RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 HBMQ6B0K9 141 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ULK3Q6PHR2 472 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SHQ1Q6PI26 577 aaKnown RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TSPYL5Q86VY4 417 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ZDHHC13Q8IUH4 622 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 PHC2Q8IXK0 858 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CADM2Q8N3J6 435 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 LINC00471Q8N535 108 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ICA1LQ8NDH6 482 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 OR4C15Q8NGM1 316 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 OR5K1Q8NHB7 308 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 POC1BQ8TC44 478 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 GPR119Q8TDV5 335 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SMAP2Q8WU79 429 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 HSD17B8Q92506 261 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 OSTF1Q92882 214 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SLC38A4Q969I6 547 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 GTPBP3Q969Y2 492 aaKnown RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CPNE4Q96A23 557 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 MPP4Q96JB8 637 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 C9orf16Q9BUW7 83 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 PRR14Q9BWN1 585 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 OSBPL10Q9BXB5 764 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 POTEKPQ9BYX7 375 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SEMA6AQ9H2E6 1030 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 VCX3BQ9H321 246 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM185BQ9H7F4 350 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CTPS2Q9NRF8 586 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ACER3Q9NUN7 267 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 VNN3Q9NY84 501 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 KLHL13Q9P2N7 655 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TMCC3Q9ULS5 477 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CUBNO60494 3623 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CR1P17927 2039 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TRBV4-1A0A0J9YWV2 114 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 ARRDC5A6NEK1 342 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 SAC3D1A6NKF1 404 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 G3V2T6 193 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 LYPD3O95274 346 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 OPN1LWP04000 364 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 PRKCAP17252 672 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 IL32P24001 234 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 EIF1P41567 113 aaKnown RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 RBM34P42696 430 aaKnown RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 HTR3AP46098 478 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 LIMS1P48059 325 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 POLR2HP52434 150 aaKnown RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 CARD18P57730 90 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 BSPH1Q075Z2 132 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 P2RY6Q15077 328 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 QPRTQ15274 297 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 SLC25A53Q5H9E4 307 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 OGFRL1Q5TC84 451 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 NUFIP2Q7Z417 695 aaKnown RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 GRINAQ7Z429 371 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 DTX2Q86UW9 622 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 KBTBD8Q8NFY9 601 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 SLC7A13Q8TCU3 470 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 ABHD3Q8WU67 409 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 ACOT11Q8WXI4 607 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM158Q8WZ71 300 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 ROBO4Q8WZ75 1007 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 NEUROG1Q92886 237 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 EME1Q96AY2 570 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 C3orf49Q96BT1 292 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 MRGPRX4Q96LA9 322 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 HS6ST2Q96MM7 605 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 PSD2Q9BQI7 771 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 FUZQ9BT04 418 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 TRAF4Q9BUZ4 470 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 ADAM19Q9H013 955 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 GABARAPL1Q9H0R8 117 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 VCXQ9H320 206 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 BARX1Q9HBU1 254 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 KRCC1Q9NPI7 259 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-206ENST00000471037 TIGARQ9NQ88 270 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 MAN2C1Q9NTJ4 1040 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 RHCGQ9UBD6 479 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 SLC7A7Q9UM01 511 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 OAZ3Q9UMX2 235 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 U3KQV3 271 aa8.01□□□□□ -1.13
SF3A1-206ENST00000471037 A0A087WUJ7 227 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 A0A096LNT2 108 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 SH3PXD2BA1X283 911 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 HTR3EA5X5Y0 456 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 ELOA3DA6NLF2 546 aaPredicted RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 GJE1A6NN92 205 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 A8MV72 311 aaPredicted RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 NDUFS7O75251 213 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 CCNB2O95067 398 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 THY1P04216 161 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 YES1P07947 543 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 PEX2P28328 305 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 SHC1P29353 583 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 TACR3P29371 465 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 SFTPDP35247 375 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 IFNGR2P38484 337 aa8□□□□□ -1.13
SF3A1-206ENST00000471037 PTDSS1P48651 473 aaKnown RBP8□□□□□ -1.13
SF3A1-206ENST00000471037 MAP2K6P52564 334 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms