RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CYP51A1Q16850 503 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 TMEM249Q2WGJ8 235 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 PHYHD1Q5SRE7 291 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF627Q7L945 461 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 WDFY1Q8IWB7 410 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 UEVLDQ8IX04 471 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 C20orf196Q8IYI0 205 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 GPR137CQ8N3F9 429 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 NUP37Q8NFH4 326 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 NANOS1Q8WY41 292 aaKnown RBP14.16□□□□□ -0.14
COL9A3-208ENST00000469802 FAM168AQ92567 244 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 FBXO17Q96EF6 278 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 SORCS2Q96PQ0 1159 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 TNFRSF13CQ96RJ3 184 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 MDFIQ99750 246 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 NPHS2Q9NP85 383 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 SELENONQ9NZV5 590 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 PMF1-BGLAPU3KQ54 211 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 FBN1P35555 2871 aaKnown RBP14.16□□□□□ -0.14
COL9A3-208ENST00000469802 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.15□□□□□ -0.142e-10■■□□□ 12.3
COL9A3-208ENST00000469802 MXRA5Q9NR99 2828 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 LRRN3E7EW58 273 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 LY6HO94772 140 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 LYPD3O95274 346 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-208ENST00000469802 OPN1SWP03999 348 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 NQO1P15559 274 aaKnown RBP14.15□□□□□ -0.14
COL9A3-208ENST00000469802 CD247P20963 164 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 SERPINF1P36955 418 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 GZMMP51124 257 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 CRYBA2P53672 197 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 SNRPD2P62316 118 aaKnown RBP14.15□□□□□ -0.14
COL9A3-208ENST00000469802 VLDLRP98155 873 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 POU3F1Q03052 451 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-208ENST00000469802 HGFACQ04756 655 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 PUDPQ08623 228 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 C6orf52Q5T4I8 152 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 WDR88Q6ZMY6 472 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 TSPYL5Q86VY4 417 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-208ENST00000469802 SLC30A8Q8IWU4 369 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 OR6T1Q8NGN1 323 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 LRR1Q96L50 414 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 MCHR1Q99705 422 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 KCNS3Q9BQ31 491 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 ASPNQ9BXN1 380 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 PCDHAC1Q9H158 963 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF442Q9H7R0 627 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 MED29Q9NX70 200 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 NOX1Q9Y5S8 564 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 COL6A5A8TX70 2615 aa14.15□□□□□ -0.14
COL9A3-208ENST00000469802 RTTNQ86VV8 2226 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 VWC2LB2RUY7 222 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 B9A039 149 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 M0QX08 132 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 M0R3G1 203 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 PLPP3O14495 311 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 SEC14L2O76054 403 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 MT-ATP6P00846 226 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 THY1P04216 161 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 ARR3P36575 388 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 IDH3GP51553 393 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-208ENST00000469802 NFYCQ13952 458 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 METTL21CQ5VZV1 264 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 PXKQ7Z7A4 578 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 PATL1Q86TB9 770 aaKnown RBP14.14□□□□□ -0.15
COL9A3-208ENST00000469802 HIPK1Q86Z02 1210 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 CCDC36Q8IYA8 594 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 OR4F15Q8NGB8 312 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 OR4D11Q8NGI4 311 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 PROX1Q92786 737 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 TAMM41Q96BW9 452 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 ZNF426Q9BUY5 554 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 EMC6Q9BV81 110 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 PLK3Q9H4B4 646 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 YAE1D1Q9NRH1 226 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 B3GNT2Q9NY97 397 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 FKBP7Q9Y680 259 aa14.14□□□□□ -0.15
COL9A3-208ENST00000469802 IGHV2OR16-5A0A0B4J2B6 119 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 A0A0G2JND7 137 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 SLC35F4A4IF30 521 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 A8MV72 311 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-208ENST00000469802 FXYD1O00168 92 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 FBP2O00757 339 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 SASH3O75995 380 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 OR4A8P0C604 315 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 PPOXP50336 477 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 IL1RL1Q01638 556 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 PMS2P3Q13401 168 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 TRMT5Q32P41 509 aaKnown RBP14.13□□□□□ -0.15
COL9A3-208ENST00000469802 ENTPD8Q5MY95 495 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 MDP1Q86V88 176 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 OR5J2Q8NH18 312 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 RNF217Q8TC41 542 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 ADAMTS16Q8TE57 1224 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 TXNDC15Q96J42 360 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 ZNF75AQ96N20 296 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 ARGLU1Q9NWB6 273 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-208ENST00000469802 USP22Q9UPT9 525 aa14.13□□□□□ -0.15
COL9A3-208ENST00000469802 CPSF4LA6NMK7 179 aaKnown RBP14.12□□□□□ -0.15
COL9A3-208ENST00000469802 NDUFS8O00217 210 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms