RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 UBE2FQ969M7 185 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CPNE4Q96A23 557 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 SIGLEC11Q96RL6 698 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 KATNB1Q9BVA0 655 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 MRPL13Q9BYD1 178 aaKnown RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 PRRG3Q9BZD7 231 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 NDEL1Q9GZM8 345 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 SLC25A18Q9H1K4 315 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 DEFB127Q9H1M4 99 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 TMEM185BQ9H7F4 350 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 INIPQ9NRY2 104 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 KLHL21Q9UJP4 597 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 ING1Q9UK53 422 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 PCDHGB5Q9Y5G0 923 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 NOX1Q9Y5S8 564 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 DNAJC13O75165 2243 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 PRRC2CQ9Y520 2896 aaKnown RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 TRIM64CA6NLI5 447 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 BLOC1S5-TXNDC5H3BN57 136 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TNFSF11O14788 317 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 PRKYO43930 277 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RAMP1O60894 148 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF432O94892 652 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 AKR7A3O95154 331 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 KLK2P20151 261 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 SLC2A5P22732 501 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 SLC25A1P53007 311 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CARD18P57730 90 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CTXN1P60606 82 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RPL27P61353 136 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CSNK2BP67870 215 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 HSF1Q00613 529 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 MYBPC1Q00872 1141 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 IL1RL1Q01638 556 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TMED1Q13445 227 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TOMM20Q15388 145 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 GUSBP1Q15486 140 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 GXYLT1Q4G148 440 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 C6orf141Q5SZD1 244 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 MEDAGQ5VYS4 303 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 HBMQ6B0K9 141 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ADCK1Q86TW2 530 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 C10orf53Q8N6V4 93 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 FAM81AQ8TBF8 368 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RNF128Q8TEB7 428 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 FAR1Q8WVX9 515 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ASB10Q8WXI3 467 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 HDAC2Q92769 488 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TMEM45BQ96B21 275 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 SLC25A36Q96CQ1 311 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 SLC38A2Q96QD8 506 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TSPAN32Q96QS1 320 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 NAA11Q9BSU3 229 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 DUSP21Q9H596 190 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 BCO1Q9HAY6 547 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TIGARQ9NQ88 270 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 PNPLA3Q9NST1 481 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 FKBP14Q9NWM8 211 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 VSX1Q9NZR4 365 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CLCF1Q9UBD9 225 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF835Q9Y2P0 537 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ADAM18Q9Y3Q7 739 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 MAP1BP46821 2468 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 A6NIZ1 184 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 EIF1AYO14602 144 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CXCL13O43927 109 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 PPP1R3DO95685 299 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 OPN1LWP04000 364 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ADORA3P0DMS8 318 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ENPP1P22413 925 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TCEA1P23193 301 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 POU1F1P28069 291 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RAP1BP61224 184 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RPS3AP61247 264 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 RAP1AP62834 184 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 KLRB1Q12918 225 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ACKR1Q16570 336 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 HIST3H3Q16695 136 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 KCTD21Q4G0X4 260 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 MESTQ5EB52 335 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CLEC12AQ5QGZ9 265 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CASP12Q6UXS9 341 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 CREB3L2Q70SY1 520 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 WDFY1Q8IWB7 410 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 PM20D2Q8IYS1 436 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 GHDCQ8N2G8 530 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 LSM14AQ8ND56 463 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ATP6V1C2Q8NEY4 427 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 OR6X1Q8NH79 312 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 PTP4A1Q93096 173 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 SARAFQ96BY9 339 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ZHX1-C8orf76Q96EF9 292 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 Q96M85 177 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ADAD1Q96M93 576 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ERMAPQ96PL5 475 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 IFT27Q9BW83 186 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 TEX12Q9BXU0 123 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 ZNF696Q9H7X3 374 aa7.27□□□□□ -1.25
NPHP3-204ENST00000469232 HINT3Q9NQE9 182 aaKnown RBP7.27□□□□□ -1.25
NPHP3-204ENST00000469232 HAO2Q9NYQ3 351 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms