RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 RBBP4Q09028 425 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 DUSP7Q16829 419 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 TMEM249Q2WGJ8 235 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 PHYHD1Q5SRE7 291 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 SWT1Q5T5J6 900 aaKnown RBP18.93■□□□□ 0.62
TTC28-204ENST00000468807 TMEM123Q8N131 208 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 DPP10Q8N608 796 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 SCAIQ8N9R8 606 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 OR6S1Q8NH40 331 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 C10orf105Q8TEF2 133 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 NANOS1Q8WY41 292 aaKnown RBP18.93■□□□□ 0.62
TTC28-204ENST00000468807 SORCS2Q96PQ0 1159 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 TNFRSF13CQ96RJ3 184 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 MDFIQ99750 246 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 ZNF385DQ9H6B1 395 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 MED29Q9NX70 200 aa18.93■□□□□ 0.62
TTC28-204ENST00000468807 LOC102725191A0A1B0GVB3 256 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 ZNF726A6NNF4 738 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 A8MV72 311 aaPredicted RBP18.92■□□□□ 0.62
TTC28-204ENST00000468807 ZNF99A8MXY4 864 aaPredicted RBP18.92■□□□□ 0.62
TTC28-204ENST00000468807 EDF1O60869 148 aaKnown RBP18.92■□□□□ 0.62
TTC28-204ENST00000468807 IGLV1-44P01699 117 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 CBR1P16152 277 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 CAMK2DQ13557 499 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 C3orf36Q3SXR2 165 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 MYPOPQ86VE0 399 aaPredicted RBP18.92■□□□□ 0.62
TTC28-204ENST00000468807 ANKS4BQ8N8V4 417 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 OR4F15Q8NGB8 312 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 OR6T1Q8NGN1 323 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 OR6N1Q8NGY5 312 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 SLC26A7Q8TE54 656 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 STON2Q8WXE9 905 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 SLC41A3Q96GZ6 507 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 TXNDC15Q96J42 360 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 ARHGDIGQ99819 225 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 TMEM43Q9BTV4 400 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 VIPAS39Q9H9C1 493 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 B3GAT2Q9NPZ5 323 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 NOX1Q9Y5S8 564 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 CUBNO60494 3623 aa18.92■□□□□ 0.62
TTC28-204ENST00000468807 A0A096LNT2 108 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 SLC35F4A4IF30 521 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 ZNF503-AS2A6NEH8 195 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 C11orf98E9PRG8 122 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 OR6A2O95222 327 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 IGKV3-15P01624 115 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 CD79AP11912 226 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 LOXL1Q08397 574 aaPredicted RBP18.91■□□□□ 0.62
TTC28-204ENST00000468807 ADIPOQQ15848 244 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 ENTPD8Q5MY95 495 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 ZNF613Q6PF04 617 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 MDP1Q86V88 176 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 C20orf196Q8IYI0 205 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 GPR32P1Q8NGA4 272 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 OR10A6Q8NH74 314 aa18.91■□□□□ 0.62
TTC28-204ENST00000468807 MRPL39Q9NYK5 338 aaKnown RBP18.91■□□□□ 0.62
TTC28-204ENST00000468807 FBN1P35555 2871 aaKnown RBP18.91■□□□□ 0.62
TTC28-204ENST00000468807 B9A039 149 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 KPNA4O00629 521 aaPredicted RBP18.9■□□□□ 0.62
TTC28-204ENST00000468807 FMO6PO60774 539 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 HLA-HP01893 362 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 ADORA3P0DMS8 318 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 ARR3P36575 388 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 PDLIM4P50479 330 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 NPTX1Q15818 432 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 C6orf52Q5T4I8 152 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 PATL1Q86TB9 770 aaKnown RBP18.9■□□□□ 0.62
TTC28-204ENST00000468807 RBM45Q8IUH3 476 aaKnown RBP18.9■□□□□ 0.62
TTC28-204ENST00000468807 SLC30A8Q8IWU4 369 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 FAM169BQ8N8A8 192 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 SIKE1Q9BRV8 207 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 PIMREGQ9BSJ6 248 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 ULBP2Q9BZM5 246 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 KAT8Q9H7Z6 458 aaKnown RBP18.9■□□□□ 0.62
TTC28-204ENST00000468807 USP22Q9UPT9 525 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 POFUT2Q9Y2G5 429 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 COL6A5A8TX70 2615 aa18.9■□□□□ 0.62
TTC28-204ENST00000468807 VSTM5A8MXK1 200 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 PLPP3O14495 311 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 CHP2O43745 196 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 PDE5AO76074 875 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 C8BP07358 591 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 USF1P22415 310 aaPredicted RBP18.89■□□□□ 0.61
TTC28-204ENST00000468807 THBS4P35443 961 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 PIGFQ07326 219 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 GGTLC2Q14390 218 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 TTC33Q6PID6 262 aaPredicted RBP18.89■□□□□ 0.61
TTC28-204ENST00000468807 ZNF813Q6ZN06 617 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 PXKQ7Z7A4 578 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 HIPK1Q86Z02 1210 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 NUP37Q8NFH4 326 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 OR5J2Q8NH18 312 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 TSPEARQ8WU66 669 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 PROX1Q92786 737 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 SLC7A7Q9UM01 511 aa18.89■□□□□ 0.61
TTC28-204ENST00000468807 YLPM1P49750 1951 aaKnown RBP18.89■□□□□ 0.61
TTC28-204ENST00000468807 RTTNQ86VV8 2226 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 hCG_2039718K7EN88 272 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 CH25HO95992 272 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 MT-ATP6P00846 226 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms