RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 PMS2P3Q13401 168 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 RAB35Q15286 201 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 MS4A18Q3C1V0 323 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 NANOGP8Q6NSW7 305 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 LINC00114Q6XXX2 140 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 CCDC36Q8IYA8 594 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 TMEM123Q8N131 208 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 C10orf53Q8N6V4 93 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 CMTM5Q96DZ9 223 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 WFDC6Q9BQY6 131 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 RHNO1Q9BSD3 238 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 NANOGQ9H9S0 305 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 GPR35Q9HC97 309 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 CRNNQ9UBG3 495 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-207ENST00000467985 GDF2Q9UK05 429 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-207ENST00000467985 MOKQ9UQ07 419 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 PMF1-BGLAPU3KQ54 211 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 IGHV1-18A0A0C4DH31 117 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 LOC100653049A0A140TA62 436 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 BBIP1A8MTZ0 92 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 FBP2O00757 339 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 SSX4O60224 188 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 NDUFS7O75251 213 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 KRT34O76011 436 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 OPN1SWP03999 348 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 CBLP22681 906 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 NUDT6P53370 316 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 ARF1P84077 181 aaKnown RBP16.64■□□□□ 0.25
COL7A1-207ENST00000467985 PPP2R2BQ00005 443 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 PUDPQ08623 228 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 VMACQ2NL98 169 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 ENTPD8Q5MY95 495 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 CCDC80Q76M96 950 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 POU5F2Q8N7G0 328 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 GPR32P1Q8NGA4 272 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 OR8J3Q8NGG0 315 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 OR6T1Q8NGN1 323 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 RP9Q8TA86 221 aaKnown RBP16.64■□□□□ 0.25
COL7A1-207ENST00000467985 LRR1Q96L50 414 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 CRLF2Q9HC73 371 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 B3GAT2Q9NPZ5 323 aa16.64■□□□□ 0.25
COL7A1-207ENST00000467985 A0A096LPE4 126 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 A0A1W2PPZ6 126 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 COX4I1P13073 169 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 CD247P20963 164 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 POU3F1Q03052 451 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-207ENST00000467985 NPTX1Q15818 432 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 CEACAM16Q2WEN9 425 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 CLEC2AQ6UVW9 174 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 PXKQ7Z7A4 578 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 TAMM41Q96BW9 452 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 LRRC58Q96CX6 371 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 MPP4Q96JB8 637 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 MOGAT1Q96PD6 335 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 ECSITQ9BQ95 431 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 PCDHAC1Q9H158 963 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 NELFAQ9H3P2 528 aa16.63■□□□□ 0.25
COL7A1-207ENST00000467985 TRAPPC13A5PLN9 417 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 CPSF4LA6NMK7 179 aaKnown RBP16.62■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF99A8MXY4 864 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-207ENST00000467985 PLPP3O14495 311 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 OR6A2O95222 327 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 HPRP00739 348 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 IGLV1-44P01699 117 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 PRDX6P30041 224 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 GZMMP51124 257 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 TTC33Q6PID6 262 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-207ENST00000467985 TRPM8Q7Z2W7 1104 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 TREML1Q86YW5 311 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 C20orf196Q8IYI0 205 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 OR5J2Q8NH18 312 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 ADAMTS16Q8TE57 1224 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 PROX1Q92786 737 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 SLC19A3Q9BZV2 496 aa16.62■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF726A6NNF4 738 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 M0R3G1 203 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 MRASO14807 208 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 IGKV3-15P01624 115 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 TP53P04637 393 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-207ENST00000467985 CECR9P0C854 216 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 HLA-DOBP13765 273 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 CBR1P16152 277 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 AHCYP23526 432 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 PCSK6P29122 969 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 ARR3P36575 388 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 NAAAQ02083 359 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 REP15Q6BDI9 236 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 ERICH5Q6P6B1 374 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 CALHM3Q86XJ0 350 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 FITM2Q8N6M3 262 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 IL17RDQ8NFM7 739 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 OR4F15Q8NGB8 312 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 VANGL1Q8TAA9 524 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-207ENST00000467985 GID8Q9NWU2 228 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 FBXO9Q9UK97 447 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-207ENST00000467985 BAG5Q9UL15 447 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 USP22Q9UPT9 525 aa16.61■□□□□ 0.25
COL7A1-207ENST00000467985 SONP18583 2426 aaKnown RBP16.61■□□□□ 0.25
COL7A1-207ENST00000467985 SLC35F4A4IF30 521 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms