RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GPR137BO60478 399 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 IGHV2-70P01814 119 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 CXCR1P25024 350 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 CDC25BP30305 580 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 HPCAL1P37235 193 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 SLC6A9P48067 706 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 ZNF81P51508 661 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 MAP2K6P52564 334 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 ERVS71-1P61550 626 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 RPL38P63173 70 aaKnown RBP8.61□□□□□ -1.03
HDAC3-203ENST00000467533 RBBP4Q09028 425 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 CAMK2DQ13557 499 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 DOC2BQ14184 412 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 RAB39AQ14964 217 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 KIAA0040Q15053 153 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 ARHGAP11BQ3KRB8 267 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 FAM209AQ5JX71 171 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 KDM8Q8N371 416 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 CPEB3Q8NE35 698 aaKnown RBP8.61□□□□□ -1.03
HDAC3-203ENST00000467533 PIK3C3Q8NEB9 887 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 BHLHE22Q8NFJ8 381 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-203ENST00000467533 OR5P2Q8WZ92 322 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 MOAP1Q96BY2 351 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 MTERF3Q96E29 417 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 METTL2AQ96IZ6 378 aaKnown RBP8.61□□□□□ -1.03
HDAC3-203ENST00000467533 FAM71F1Q96KD3 344 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-203ENST00000467533 PRPF18Q99633 342 aaKnown RBP8.61□□□□□ -1.03
HDAC3-203ENST00000467533 FN3KRPQ9HA64 309 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 C1orf109Q9NX04 203 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 BAIAP2L1Q9UHR4 511 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 FBXL3Q9UKT7 428 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 PPP2R2CQ9Y2T4 447 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 WDR45Q9Y484 360 aa8.61□□□□□ -1.03
HDAC3-203ENST00000467533 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 DUXAA6NLW8 204 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 CFLARO15519 480 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 AKAP8O43823 692 aaKnown RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 UBOX5O94941 541 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 UBL3O95164 117 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 C6orf47O95873 294 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 GSTA1P08263 222 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 UQCRBP14927 111 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 B4GALT1P15291 398 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 ZNF250P15622 560 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 ZNF43P17038 809 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 IMPDH1P20839 514 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 MATN1P21941 496 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 GTF2E2P29084 291 aaKnown RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 RAB1AP62820 205 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 PLAURQ03405 335 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 COL10A1Q03692 680 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 DBPQ10586 325 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 HNRNPA0Q13151 305 aaKnown RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 LARS2Q15031 903 aaKnown RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 MOGQ16653 247 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 GPR157Q5UAW9 335 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 TYW3Q6IPR3 259 aaKnown RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 LRRN1Q6UXK5 716 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 C1orf174Q8IYL3 243 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 TMEM151AQ8N4L1 468 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 TBC1D15Q8TC07 691 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 SSMEM1Q8WWF3 244 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 OIT3Q8WWZ8 545 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 C11orf40Q8WZ69 217 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 CNOT9Q92600 299 aaKnown RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 PHF21AQ96BD5 680 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 NEURL3Q96EH8 262 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 SLC35G5Q96KT7 338 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 EGLN1Q9GZT9 426 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 CDH20Q9HBT6 801 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-203ENST00000467533 EXD2Q9NVH0 621 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 IL20RAQ9UHF4 553 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
HDAC3-203ENST00000467533 TM9SF1O15321 606 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 IGHV1-46P01743 117 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 INHBAP08476 426 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 UROSP10746 265 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 TCP1P17987 556 aaKnown RBP8.59□□□□□ -1.03
HDAC3-203ENST00000467533 FUT4P22083 530 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 PRPH2P23942 346 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 ATP5F1P24539 256 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-203ENST00000467533 ETF1P62495 437 aaKnown RBP8.59□□□□□ -1.03
HDAC3-203ENST00000467533 KCNJ10P78508 379 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 EGR3Q06889 387 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 BST1Q10588 318 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 BNIP2Q12982 314 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 C1DQ13901 141 aaKnown RBP8.59□□□□□ -1.03
HDAC3-203ENST00000467533 LSM12Q3MHD2 195 aaKnown RBP8.59□□□□□ -1.03
HDAC3-203ENST00000467533 TMEM155Q4W5P6 130 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 PHYHD1Q5SRE7 291 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 LIPMQ5VYY2 423 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 CARD17Q5XLA6 110 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 Q6ZSV7 163 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 Q6ZTK2 550 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 POU5F2Q8N7G0 328 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 CCNYL1Q8N7R7 359 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 OR7A2PQ8NGA2 310 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 PSMA8Q8TAA3 256 aa8.59□□□□□ -1.03
HDAC3-203ENST00000467533 ZNF519Q8TB69 540 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms