RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 B2MP61769 119 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ILF2Q12905 390 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 TRAP1Q12931 704 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 IL24Q13007 206 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 DDX39BQ13838 428 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 CBFBQ13951 182 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 COTL1Q14019 142 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 RNPS1Q15287 305 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PDK4Q16654 411 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ZSWIM7Q19AV6 140 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 TMEM44Q2T9K0 475 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PRICKLE4Q2TBC4 344 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 IQCCQ4KMZ1 466 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PDSS1Q5T2R2 415 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 C18orf63Q68DL7 685 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 FAM45BPQ6NSW5 357 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ACSM6Q6P461 480 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 METAP1DQ6UB28 335 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 TFAP2EQ6VUC0 442 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 Q6ZT83 130 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 FRA10AC1Q70Z53 315 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 BHLHA15Q7RTS1 189 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF551Q7Z340 670 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 LUZP1Q86V48 1076 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 LINC00346Q8IVM7 164 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 SLC22A9Q8IVM8 553 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 SNX31Q8N9S9 440 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 BOLLQ8N9W6 283 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 OR2M3Q8NG83 312 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 OR4K14Q8NGD5 310 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 OR13C2Q8NGS9 318 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 RP9Q8TA86 221 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 FAM45AQ8TCE6 357 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 THRSPQ92748 146 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 LRRC39Q96DD0 335 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 MTBPQ96DY7 904 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 BTBD9Q96Q07 612 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 NAA11Q9BSU3 229 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 TRMOQ9BU70 441 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 SUCNR1Q9BXA5 334 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 SLITRK2Q9H156 845 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 METTL17Q9H7H0 456 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 DDX31Q9H8H2 851 aaKnown RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 COQ10BQ9H8M1 238 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PLEKHA2Q9HB19 425 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 DUSP22Q9NRW4 184 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF639Q9UID6 485 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 POU2F3Q9UKI9 436 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ABCG2Q9UNQ0 655 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 SLC12A4Q9UP95 1085 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 UBE2J1Q9Y385 318 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-207ENST00000467273 ASB4Q9Y574 426 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 PCDHGB1Q9Y5G3 927 aa4.73□□□□□ -1.65
PTCD3-207ENST00000467273 A0A087WZY1 265 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 IGLV3-32A0A0A0MS00 114 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 A0A0A6YYD5 115 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 GOLGA6L10A6NI86 522 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 OR5H1A6NKK0 313 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 B4DSR2 109 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF879B4DU55 563 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 PLPP1O14494 284 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 SULT1B1O43704 296 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TSPAN2O60636 221 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TTC4O95801 387 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 IL1AP01583 271 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 FAM58BPP0C7Q3 252 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ZSCAN5DPP0CG00 497 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 HKR1P10072 659 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ANXA8P13928 327 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 CPMP14384 443 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 NT5EP21589 574 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 FPR3P25089 353 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 IL12BP29460 328 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 MAGEA3P43357 314 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 SLC6A8P48029 635 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 NPY4RP50391 375 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 RPP30P78346 268 aaKnown RBP4.72□□□□□ -1.65
PTCD3-207ENST00000467273 PHEXP78562 749 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 IRF8Q02556 426 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 CUL3Q13618 768 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 GNA13Q14344 377 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TGFBIQ15582 683 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TBRG1Q3YBR2 411 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 LRRC23Q53EV4 343 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TEX35Q5T0J7 233 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 SEL1L2Q5TEA6 688 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ANXA8L1Q5VT79 327 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ADNP2Q6IQ32 1131 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 MED27Q6P2C8 311 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 MSANTD1Q6ZTZ1 278 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ZNF565Q8N9K5 539 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 SYT14Q8NB59 555 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 OR7G3Q8NG95 312 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 OR10D3Q8NH80 312 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 NFKBIDQ8NI38 313 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 RNF128Q8TEB7 428 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 TMBIM1Q969X1 311 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 HES6Q96HZ4 224 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 ADGRG7Q96K78 797 aa4.72□□□□□ -1.65
PTCD3-207ENST00000467273 FOXN4Q96NZ1 517 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms