RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 HCRTR2O43614 444 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 IDH3BO43837 385 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 PTP4A3O75365 173 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 NDUFB2O95178 105 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 SP1P08047 785 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 ADORA3P0DMS8 318 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 MYL12AP19105 171 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 PAICSP22234 425 aaKnown RBP12.44□□□□□ -0.42
HDAC6-215ENST00000465457 C21orf33P30042 268 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-215ENST00000465457 HTR1FP30939 366 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 MTNR1AP48039 350 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 CDH11P55287 796 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 ZNF117Q03924 483 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 TIGD6Q17RP2 521 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 TIMM50Q3ZCQ8 353 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 AADACL4Q5VUY2 407 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 CXXC5Q7LFL8 322 aaKnown RBP12.44□□□□□ -0.42
HDAC6-215ENST00000465457 ZNF227Q86WZ6 799 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 GATSQ8NAP1 163 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 OR13C2Q8NGS9 318 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 M1APQ8TC57 530 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 TMEM234Q8WY98 164 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 IFT27Q9BW83 186 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 CLEC4MQ9H2X3 399 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-215ENST00000465457 AMBNQ9NP70 447 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 FGF20Q9NP95 211 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-215ENST00000465457 KCNJ16Q9NPI9 418 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 TIMMDC1Q9NPL8 285 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 CMC2Q9NRP2 79 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 SDHAF3Q9NRP4 125 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 SLC6A5Q9Y345 797 aa12.44□□□□□ -0.42
HDAC6-215ENST00000465457 EXOSC1Q9Y3B2 195 aaKnown RBP12.44□□□□□ -0.42
HDAC6-215ENST00000465457 OR7A10O76100 309 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 NTN1O95631 604 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 PEPDP12955 493 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 CD46P15529 392 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 ZNF3P17036 446 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 HK1P19367 917 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 PAX7P23759 505 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 PTGS2P35354 604 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 OC90Q02509 493 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-215ENST00000465457 C17orf67Q0P5P2 114 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 NDUFAF6Q330K2 333 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 EMC4Q5J8M3 183 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 CLEC9AQ6UXN8 241 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 APOOLQ6UXV4 268 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
HDAC6-215ENST00000465457 TMEM178AQ8NBL3 297 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 PROKR2Q8NFJ6 384 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 B4GALNT2Q8NHY0 566 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 ELP5Q8TE02 316 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 RNF138Q8WVD3 245 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 ASB5Q8WWX0 329 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 C18orf12Q96KH6 178 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 DEFB126Q9BYW3 111 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 ADAM19Q9H013 955 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 MMP25Q9NPA2 562 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 MYOTQ9UBF9 498 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 KLHL21Q9UJP4 597 aa12.43□□□□□ -0.42
HDAC6-215ENST00000465457 ARHGAP21Q5T5U3 1957 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 SLC22A31A6NKX4 558 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 MYL12BO14950 172 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 NME2P1O60361 137 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 SLC25A12O75746 678 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 FBXO45P0C2W1 286 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 ICAM2P13598 275 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 APEHP13798 732 aaKnown RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 NME2P22392 152 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 DNASE1P24855 282 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 CAPZA2P47755 286 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 POLR2HP52434 150 aaKnown RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 MAP2K6P52564 334 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 RPS4XP62701 263 aaKnown RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 DYNC1I2Q13409 638 aaKnown RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 SLC25A25Q6KCM7 469 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 CBLN3Q6UW01 205 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 DPY19L2P2Q6ZN68 376 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 SLC16A12Q6ZSM3 486 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 GRINAQ7Z429 371 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 MARCH3Q86UD3 253 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 OR9Q1Q8NGQ5 310 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 ST8SIA1Q92185 356 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 RND1Q92730 232 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 HGDQ93099 445 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 RNFT2Q96EX2 444 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 GPX7Q96SL4 187 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 SECISBP2Q96T21 854 aaKnown RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 ZNF229Q9UJW7 825 aa12.42□□□□□ -0.42
HDAC6-215ENST00000465457 ANK3Q12955 4377 aaKnown RBP12.42□□□□□ -0.42
HDAC6-215ENST00000465457 IGKV1D-42A0A075B6H8 117 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 IGLV3-32A0A0A0MS00 114 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 PRR23D1E9PI22 279 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-215ENST00000465457 TP53I11O14683 189 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 ARPC3O15145 178 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 OIP5O43482 229 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 PRKNO60260 465 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-215ENST00000465457 NUDT14O95848 222 aa12.41□□□□□ -0.42
HDAC6-215ENST00000465457 BCL10O95999 233 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms