RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 BASP1P80723 227 aaKnown RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 FKBP3Q00688 224 aaKnown RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 MADCAM1Q13477 382 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SLC17A1Q14916 467 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 TSC22D1Q15714 1073 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 VAMP3Q15836 100 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SLC15A2Q16348 729 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 HAGHQ16775 308 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 CCDC14Q49A88 953 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SPANXN4Q5MJ08 99 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 C9orf135Q5VTT2 229 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 OLFML2AQ68BL7 652 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 PRR5LQ6MZQ0 368 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 PPP1R2P3Q6NXS1 205 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 C1orf94Q6P1W5 598 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 ULK3Q6PHR2 472 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 ATRAIDQ6UW56 229 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 Q6ZVQ6 151 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SLC35D2Q76EJ3 337 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 MTERF4Q7Z6M4 381 aaKnown RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SLC26A11Q86WA9 606 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 DND1Q8IYX4 353 aaKnown RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 INO80EQ8NBZ0 244 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 OR4D9Q8NGE8 314 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 RHOXF1Q8NHV9 184 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 SETD7Q8WTS6 366 aaKnown RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 MYDGFQ969H8 173 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 FAM131CQ96AQ9 280 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 TADA1Q96BN2 335 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 CHMP6Q96FZ7 201 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 MAP1LC3CQ9BXW4 147 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 WDR55Q9H6Y2 383 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 BEX1Q9HBH7 125 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 CD209Q9NNX6 404 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 NANSQ9NR45 359 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 RBAKQ9NYW8 714 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 CYTH4Q9UIA0 394 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 NUP50Q9UKX7 468 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 PSMD13Q9UNM6 376 aa3.13□□□□□ -1.91
ITGB1-208ENST00000464001 EXOSC1Q9Y3B2 195 aaKnown RBP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 PUS1Q9Y606 427 aaKnown RBP eCLIP3.13□□□□□ -1.91
ITGB1-208ENST00000464001 USP47Q96K76 1375 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 JCADQ9P266 1359 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 A0A0A6YYD4 124 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NSG1A0A0A6YYJ2 146 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NPIPA5A0A0B4J1W7 369 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 IQCMA0A1B0GVH7 501 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NPIPA5E9PKD4 350 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 F5H6K3 240 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 K7ERI5 159 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 AIM2O14862 343 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SULT1B1O43704 296 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 OR10H3O60404 316 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 PDE5AO76074 875 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 AP2A1O95782 977 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 CD160O95971 181 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 RPN2P04844 631 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 HBQ1P09105 142 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 H2AFXP16104 143 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 GABRR2P28476 465 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SAA4P35542 130 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 RPL4P36578 427 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 P2RY2P41231 377 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NBL1P41271 181 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 NSG1P42857 185 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TMED10P49755 219 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 UCNP55089 124 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 MLF1P58340 268 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 B2MP61769 119 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TSPAN5P62079 268 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 RPS15AP62244 130 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 DGCR6Q14129 220 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 SERTAD2Q14140 314 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TNXAQ16473 311 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TIGITQ495A1 244 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 FAM106AQ4KMX7 169 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF691Q5VV52 312 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 RSBN1Q5VWQ0 802 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 STUMQ69YW2 141 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF836Q6ZNA1 936 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 LRRC74BQ6ZQY2 392 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ZNF621Q6ZSS3 439 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 APTXQ7Z2E3 356 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 PAGE2Q7Z2X7 111 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TSEN54Q7Z6J9 526 aaKnown RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 CATSPER3Q86XQ3 398 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 BOD1L2Q8IYS8 172 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 TRAM1L1Q8N609 369 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 KIR3DL3Q8N743 410 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 GVQW1Q8N7I0 195 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 OR56A4Q8NGH8 313 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 OR52H1Q8NGJ2 320 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 FBXO25Q8TCJ0 367 aa3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 ACOT11Q8WXI4 607 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-208ENST00000464001 CXorf40BQ96DE9 158 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms