RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 RASSF5Q8WWW0 418 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF837Q96EG3 531 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-203ENST00000460264 SLC38A2Q96QD8 506 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 ECSITQ9BQ95 431 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 CRLF2Q9HC73 371 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 MOKQ9UQ07 419 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 NOX1Q9Y5S8 564 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 ARFGEF3Q5TH69 2177 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 HIVEP2P31629 2446 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 PLPP3O14495 311 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 PAX7P23759 505 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 CEACAM16Q2WEN9 425 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 HSP90B2PQ58FF3 399 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 PHYHD1Q5SRE7 291 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 ADAD1Q96M93 576 aaKnown RBP16.49■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF426Q9BUY5 554 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 EMC6Q9BV81 110 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 MED29Q9NX70 200 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 CRNNQ9UBG3 495 aaPredicted RBP16.49■□□□□ 0.23
COL5A1-203ENST00000460264 SLC7A7Q9UM01 511 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 USP22Q9UPT9 525 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 CAPN7Q9Y6W3 813 aa16.49■□□□□ 0.23
COL5A1-203ENST00000460264 LOC100653049A0A140TA62 436 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 RNF223E7ERA6 249 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 KRT34O76011 436 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 IGLV1-44P01699 117 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 HOXB1P14653 301 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-203ENST00000460264 C3orf36Q3SXR2 165 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 CARD17Q5XLA6 110 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 PXKQ7Z7A4 578 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 WDFY1Q8IWB7 410 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 C20orf196Q8IYI0 205 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 PCYOX1LQ8NBM8 494 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 OR5J2Q8NH18 312 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 C10orf82Q8WW14 230 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 PROX1Q92786 737 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 TXNDC15Q96J42 360 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF583Q96ND8 569 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 KATNB1Q9BVA0 655 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 MOV10Q9HCE1 1003 aaKnown RBP16.48■□□□□ 0.23
COL5A1-203ENST00000460264 MED4Q9NPJ6 270 aa16.48■□□□□ 0.23
COL5A1-203ENST00000460264 SLC35F4A4IF30 521 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF99A8MXY4 864 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-203ENST00000460264 H7C417 338 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 M0R3G1 203 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 CECR9P0C854 216 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 APOBEC3AP31941 199 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-203ENST00000460264 NAAAQ02083 359 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 KRTAP1-1Q07627 177 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF74Q16587 644 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 ERICH5Q6P6B1 374 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 TTC33Q6PID6 262 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-203ENST00000460264 FAM169BQ8N8A8 192 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 MPP4Q96JB8 637 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 KCNS3Q9BQ31 491 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 REG4Q9BYZ8 158 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 SEC61A2Q9H9S3 476 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 GID8Q9NWU2 228 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 ARMCX1Q9P291 453 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 SH3GLB1Q9Y371 365 aa16.47■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF503-AS2A6NEH8 195 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 FAM220BPB1ANY3 271 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 KPNA4O00629 521 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-203ENST00000460264 SLC22A2O15244 555 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 SSX4O60224 188 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 SERPINI2O75830 405 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 SEC14L2O76054 403 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 CH25HO95992 272 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 IGKV3-15P01624 115 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 CRYAAP02489 173 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 ADORA3P0DMS8 318 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 TNFRSF1BP20333 461 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 AHCYP23526 432 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 NUDT6P53370 316 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 CARM1Q86X55 608 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 MAPK1IP1LQ8NDC0 245 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 HTRA1Q92743 480 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 LRR1Q96L50 414 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 PRSS27Q9BQR3 290 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 SLC19A3Q9BZV2 496 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 BAG5Q9UL15 447 aa16.46■□□□□ 0.23
COL5A1-203ENST00000460264 C11orf98E9PRG8 122 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 CELA3BP08861 270 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 CBR1P16152 277 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 MDH1P40925 334 aaKnown RBP16.45■□□□□ 0.22
COL5A1-203ENST00000460264 CHRNB3Q05901 458 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 CAMK2DQ13557 499 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 MYPOPQ86VE0 399 aaPredicted RBP16.45■□□□□ 0.22
COL5A1-203ENST00000460264 LRRC17Q8N6Y2 441 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 POU5F2Q8N7G0 328 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 RCN3Q96D15 328 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 B3GAT2Q9NPZ5 323 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 NANSQ9NR45 359 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF229Q9UJW7 825 aa16.45■□□□□ 0.22
COL5A1-203ENST00000460264 ABCA1O95477 2261 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 ZNF726A6NNF4 738 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 OR6A2O95222 327 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 IFNGR1P15260 489 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 CALCRP30988 508 aa16.44■□□□□ 0.22
COL5A1-203ENST00000460264 IDH3GP51553 393 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms