RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 A0A087WUU8 490 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 TNFRSF11BO00300 401 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 NDUFB2O95178 105 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 FPR3P25089 353 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ZNF84P51523 738 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 LTBQ06643 244 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ALG10Q5BKT4 473 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 OAFQ86UD1 273 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 OR4K5Q8NGD3 323 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 SLC25A44Q96H78 314 aaPredicted RBP9.45□□□□□ -0.9
UBR4-208ENST00000459947 ESRP2Q9H6T0 727 aaKnown RBP9.45□□□□□ -0.9
UBR4-208ENST00000459947 BAIAP2Q9UQB8 552 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ARPC4-TTLL3A0A0A6YYG9 625 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 UNC119BA6NIH7 251 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ZNF814B7Z6K7 855 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 CCNB2O95067 398 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 RPS4XP62701 263 aaKnown RBP9.45□□□□□ -0.9
UBR4-208ENST00000459947 ANKRD16Q6P6B7 361 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 PODNL1Q6PEZ8 512 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 ZNF566Q969W8 418 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 MUS81Q96NY9 551 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 OR2M2Q96R28 347 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 SNX18Q96RF0 628 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 PRSS50Q9UI38 385 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 POMPQ9Y244 141 aa9.45□□□□□ -0.9
UBR4-208ENST00000459947 CLOCKO15516 846 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 IDH3BO43837 385 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 DEAF1O75398 565 aaPredicted RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 ZNF432O94892 652 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 SLC6A6P31641 620 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 UBE2NP61088 152 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 RPL18Q07020 188 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 FAM27E3Q08E93 113 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 FBXW10Q5XX13 1052 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 CLDN22Q8N7P3 220 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 SEPHS2Q99611 448 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 CADM1Q9BY67 442 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 CRIM1Q9NZV1 1036 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 TCRBV3S1A0A5B6 114 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 PDLIM1O00151 329 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 FFAR1O14842 300 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 RPS6KA3P51812 740 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 FAPQ12884 760 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 TSPO2Q5TGU0 170 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 PLXDC2Q6UX71 529 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 YTHDF3Q7Z739 585 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 ADCK1Q86TW2 530 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 TMEM123Q8N131 208 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 PFN4Q8NHR9 129 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 TMEM54Q969K7 222 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 NRBF2Q96F24 287 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 OSBPL10Q9BXB5 764 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 ULBP2Q9BZM5 246 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 SLC7A10Q9NS82 523 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 ENOPH1Q9UHY7 261 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 ATMQ13315 3056 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 MED12Q93074 2177 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 GNGT2O14610 69 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 OR10H3O60404 316 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 RAMP1O60894 148 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 FARS2O95363 451 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 YAP1P46937 504 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 CLRN1P58418 232 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 PPA1Q15181 289 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 DNM1P34Q6PK57 102 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 ADGRG5Q8IZF4 528 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 OR52L1Q8NGH7 329 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 SLC7A13Q8TCU3 470 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 RBP7Q96R05 134 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 SLC17A5Q9NRA2 495 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 FBXO9Q9UK97 447 aaPredicted RBP9.44□□□□□ -0.9
UBR4-208ENST00000459947 V9GYQ6 96 aa9.44□□□□□ -0.9
UBR4-208ENST00000459947 BLOC1S5-TXNDC5H3BN57 136 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 CD14P08571 375 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 GUCA1AP43080 201 aaPredicted RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 RPL27P61353 136 aaKnown RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 GABPB1Q06547 395 aaPredicted RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 COX10Q12887 443 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 TSPAN31Q12999 210 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 TSPYL5Q86VY4 417 aaPredicted RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 P3H2Q8IVL5 708 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 DEPDC4Q8N2C3 294 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 NOXO1Q8NFA2 376 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 IL17RDQ8NFM7 739 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 FUZQ9BT04 418 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 GPR35Q9HC97 309 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 TAS2R5Q9NYW4 299 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 DNAJB9Q9UBS3 223 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 SAMHD1Q9Y3Z3 626 aaKnown RBP9.43□□□□□ -0.9
UBR4-208ENST00000459947 MPDZO75970 2070 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 FAM221AA4D161 298 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 J3KTA2 159 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 XKRYO14609 159 aa9.43□□□□□ -0.9
UBR4-208ENST00000459947 BIDP55957 195 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms