RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 MEGF8Q7Z7M0 2845 aa12.97□□□□□ -0.33
LMNA-209ENST00000459904 IGKV1D-42A0A075B6H8 117 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 MS4A18H0YCH9 400 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 KCNAB3O43448 404 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 EDF1O60869 148 aaKnown RBP12.96□□□□□ -0.33
LMNA-209ENST00000459904 VAMP5O95183 116 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 AVPP01185 164 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 NR4A1P22736 598 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 HTR2AP28223 471 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 GTF2E2P29084 291 aaKnown RBP12.96□□□□□ -0.33
LMNA-209ENST00000459904 GRPRP30550 384 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 MAP2K6P52564 334 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 DVL1P1P54792 670 aaPredicted RBP12.96□□□□□ -0.33
LMNA-209ENST00000459904 MS4A18Q3C1V0 323 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 C3orf36Q3SXR2 165 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 GLIPR1L2Q4G1C9 344 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 ZNF311Q5JNZ3 666 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 RNF220Q5VTB9 566 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 NXNQ6DKJ4 435 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 C1orf229Q6ZS94 237 aaPredicted RBP12.96□□□□□ -0.33
LMNA-209ENST00000459904 TMEM123Q8N131 208 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 RNF217Q8TC41 542 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 STK35Q8TDR2 534 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 ZNF75AQ96N20 296 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 ANKRD27Q96NW4 1050 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 WFDC6Q9BQY6 131 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 SPATA9Q9BWV2 254 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 OR51B6Q9H340 312 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 PIF1Q9H611 641 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 HIF1ANQ9NWT6 349 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 MED29Q9NX70 200 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 REV1Q9UBZ9 1251 aa12.96□□□□□ -0.33
LMNA-209ENST00000459904 GMNCA6NCL1 334 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 TRAF3IP2O43734 574 aaPredicted RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 SERPINI2O75830 405 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 ANP32DO95626 131 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 KRT75O95678 551 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 NAT2P11245 290 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 EGR1P18146 543 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 RBMXP38159 391 aaKnown RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 CRISP3P54108 245 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 CAMK2DQ13557 499 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 OGFOD2Q6N063 350 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 C10orf111Q8N326 155 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 GTF3AQ92664 365 aaKnown RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 HPS1Q92902 700 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 MRPL24Q96A35 216 aaKnown RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 LRRC37BQ96QE4 947 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 TSPAN32Q96QS1 320 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 TPT1P8Q9HAU6 139 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 ZNF275Q9NSD4 429 aaPredicted RBP12.95□□□□□ -0.34
LMNA-209ENST00000459904 B3GNT2Q9NY97 397 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 ZNF224Q9NZL3 707 aa12.95□□□□□ -0.34
LMNA-209ENST00000459904 A0A1B0GWA3 101 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 ZNF99A8MXY4 864 aaPredicted RBP12.94□□□□□ -0.34
LMNA-209ENST00000459904 TPST1O60507 370 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
LMNA-209ENST00000459904 ERCC1P07992 297 aaPredicted RBP12.94□□□□□ -0.34
LMNA-209ENST00000459904 B4GALT1P15291 398 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 ZNF14P17017 642 aaPredicted RBP12.94□□□□□ -0.34
LMNA-209ENST00000459904 ARR3P36575 388 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 PTDSS1P48651 473 aaKnown RBP12.94□□□□□ -0.34
LMNA-209ENST00000459904 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
LMNA-209ENST00000459904 ACTG1P63261 375 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 RAB39AQ14964 217 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 SLC9B1Q4ZJI4 515 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 AVPI1Q5T686 147 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 ZNF813Q6ZN06 617 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 GLCCI1Q86VQ1 547 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 FAM169BQ8N8A8 192 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 ZBTB18Q99592 522 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 FGFR1OP2Q9NVK5 253 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 RPS6KB2Q9UBS0 482 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 DUSP13Q9UII6 198 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 RCE1Q9Y256 329 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 PCDHB14Q9Y5E9 798 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 MGAM2Q2M2H8 2515 aa12.94□□□□□ -0.34
LMNA-209ENST00000459904 LOC105371242A0A075B767 164 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 B4DSR2 109 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 M0R233 179 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 AIM2O14862 343 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 PPIHO43447 177 aaKnown RBP12.93□□□□□ -0.34
LMNA-209ENST00000459904 SYNGR3O43761 229 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 CDC14BO60729 498 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 TGDSO95455 350 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 CLPTM1O96005 669 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 SAGP10523 405 aaPredicted RBP12.93□□□□□ -0.34
LMNA-209ENST00000459904 CCL2P13500 99 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 ZNF35P13682 527 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
LMNA-209ENST00000459904 DRD4P21917 467 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 MAGEB1P43366 347 aa12.93□□□□□ -0.34
LMNA-209ENST00000459904 MFSD13AQ14CX5 517 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms