RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 TRIM33Q9UPN9 1127 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 NDUFAF1Q9Y375 327 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 MEGF8Q7Z7M0 2845 aa13.69□□□□□ -0.22
CHCHD3-204ENST00000457942 A0A087WUJ7 227 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 A0A0B4J2E0 115 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 A0A1B0GX12 115 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 VSTM5A8MXK1 200 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 B9A039 149 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 RPL36A-HNRNPH2H7BZ11 118 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 M0R3H8 397 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 TRAF3IP2O43734 574 aaPredicted RBP13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 OPN1SWP03999 348 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 CELA3BP08861 270 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 HOXB1P14653 301 aaPredicted RBP13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 AHCYP23526 432 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 MTPNP58546 118 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 SWI5Q1ZZU3 235 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 HSP90B2PQ58FF3 399 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 ANKS4BQ8N8V4 417 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 ANKK1Q8NFD2 765 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 OR4F15Q8NGB8 312 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 PROX1Q92786 737 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 MCHR1Q99705 422 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 EMC6Q9BV81 110 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 RSPO3Q9BXY4 272 aaPredicted RBP13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 SLC52A3Q9NQ40 469 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 CRNNQ9UBG3 495 aaPredicted RBP13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
CHCHD3-204ENST00000457942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.68□□□□□ -0.225e-6■■■■□ 22.8
CHCHD3-204ENST00000457942 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 ZNF99A8MXY4 864 aaPredicted RBP13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 HPRP00739 348 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 BGLAPP02818 100 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 HLA-DOBP13765 273 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 CBR1P16152 277 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 SRD5A1P18405 259 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 USF1P22415 310 aaPredicted RBP13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 CALCRP30988 508 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 ARR3P36575 388 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 CDH12P55289 794 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 VLDLRP98155 873 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 RUNX1T1Q06455 604 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 PUDPQ08623 228 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 NFYCQ13952 458 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 MST1LQ2TV78 715 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 C3orf36Q3SXR2 165 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 RUNDC3AQ59EK9 446 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 CYB5R2Q6BCY4 276 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 DLEU7Q6UYE1 221 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 TMEM123Q8N131 208 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 SCAIQ8N9R8 606 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 OR6N1Q8NGY5 312 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 VANGL1Q8TAA9 524 aaPredicted RBP13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 CGREF1Q99674 301 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 EVA1AQ9H8M9 152 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 NPHS2Q9NP85 383 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 MED29Q9NX70 200 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 POFUT2Q9Y2G5 429 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 GMEB1Q9Y692 573 aa13.67□□□□□ -0.22
CHCHD3-204ENST00000457942 YLPM1P49750 1951 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 A0A0G2JND7 137 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 SLC35F4A4IF30 521 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 CPSF4LA6NMK7 179 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 LRRN3E7EW58 273 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 C11orf98E9PRG8 122 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 EDF1O60869 148 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 FZD7O75084 574 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 PDE5AO76074 875 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 MFN2O95140 757 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 OR6A2O95222 327 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 IGKV3-15P01624 115 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 IGLV1-44P01699 117 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 ERCC1P07992 297 aaPredicted RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 CD79AP11912 226 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 IGFBP5P24593 272 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 GUCY1A3Q02108 690 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 RBBP4Q09028 425 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 SELPLGQ14242 412 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 ADIPOQQ15848 244 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 ADRM1Q16186 407 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 IQCCQ4KMZ1 466 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 SWT1Q5T5J6 900 aaKnown RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 SPATA21Q7Z572 469 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 MDP1Q86V88 176 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 MYPOPQ86VE0 399 aaPredicted RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 FAM169BQ8N8A8 192 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 OR6S1Q8NH40 331 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 ZNF837Q96EG3 531 aaPredicted RBP13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 ANKRD27Q96NW4 1050 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 WFDC6Q9BQY6 131 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 ULBP2Q9BZM5 246 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 RAB1BQ9H0U4 201 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 DYNLRB1Q9NP97 96 aa13.66□□□□□ -0.22
CHCHD3-204ENST00000457942 MRPL39Q9NYK5 338 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms