RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ARPC5O15511 151 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 NUDT21O43809 227 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SUSD5O60279 629 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 GMDSO60547 372 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CTSVO60911 334 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 OR2A4O95047 310 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MPC2O95563 127 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 KLF8O95600 359 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 WDPCPO95876 746 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TXNDC12O95881 172 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CYB5AP00167 134 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MT-ATP6P00846 226 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 HLA-DQA2P01906 255 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 HPXP02790 462 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MAS1P04201 325 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 LPLP06858 475 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CT62P0C5K7 136 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ANKRD34CP0C6C1 535 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ACSM4P0C7M7 580 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 OR8G3PP0DMU2 310 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ZNF35P13682 527 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CTSEP14091 401 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 IL9P15248 144 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RPA2P15927 270 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ANXA7P20073 488 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 FCARP24071 287 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CXCR1P25024 350 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ITPKBP27987 946 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 IL12BP29460 328 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 GRPRP30550 384 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 DCTDP32321 178 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 GALNSP34059 522 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 AQP2P41181 271 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ACAA2P42765 397 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RAD52P43351 418 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RABIFP47224 123 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SOX2P48431 317 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 PTH2RP49190 550 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 STARP49675 285 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 VEGFBP49765 207 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SELENOPP49908 381 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MNX1P50219 401 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 BLKP51451 505 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MECP2P51608 486 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 PGDP52209 483 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RIDAP52758 137 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 HCCSP53701 268 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TAS2R31P59538 309 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 DCAF7P61962 342 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RPS11P62280 158 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RPS4XP62701 263 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 PPP2CBP62714 309 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 PPP2CAP67775 309 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MGAT2Q10469 447 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CBFBQ13951 182 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MEF2DQ14814 521 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 GRM7Q14831 915 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 UBXN2BQ14CS0 331 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ZMYND11Q15326 602 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ZNF74Q16587 644 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ALG11Q2TAA5 492 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 LINC00303Q3SY05 128 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SMUG1Q53HV7 270 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TMEM240Q5SV17 173 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CLVS2Q5SYC1 327 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 HLA-DQA1Q5Y7H0 255 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TANGO2Q6ICL3 276 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SLC18B1Q6NT16 456 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MTFR2Q6P444 385 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ANKRD16Q6P6B7 361 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TMEM65Q6PI78 240 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 DNM1P34Q6PK57 102 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TSSK4Q6SA08 328 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TMEM205Q6UW68 189 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 C5orf46Q6UWT4 87 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 LINC00114Q6XXX2 140 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 STAC2Q6ZMT1 411 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 OVCH2Q7RTZ1 564 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 MAMDC2Q7Z304 686 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 NUP54Q7Z3B4 507 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 PRSS42Q7Z5A4 293 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 HSD17B13Q7Z5P4 300 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ADGRE4PQ86SQ3 457 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 GPAT4Q86UL3 456 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 CDC20BQ86Y33 519 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SERPINA12Q8IW75 414 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 SFTPA1Q8IWL2 248 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 PM20D2Q8IYS1 436 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 BEST3Q8N1M1 668 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 C12orf45Q8N5I9 185 aaPredicted RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 RFLNBQ8N5W9 214 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 BCORP1Q8N888 145 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 ZNF454Q8N9F8 522 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 C19orf47Q8N9M1 422 aaKnown RBP3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 TMEM229BQ8NBD8 167 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 NPEPL1Q8NDH3 523 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 OR11H4Q8NGC9 324 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 OR5T2Q8NGG2 359 aa3.04□□□□□ -1.92
HMGN1P18-201ENST00000457642 OR5T3Q8NGG3 340 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms