RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC17A5Q9NRA2 495 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 NPAP1Q9NZP6 1156 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 EGFL7Q9UHF1 273 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 MAGEL2Q9UJ55 1249 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 ADAM21Q9UKJ8 722 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 AMDHD2Q9Y303 409 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 RNF115Q9Y4L5 304 aa15.21■□□□□ 0.03
USP39-208ENST00000455732 ALPK2Q86TB3 2170 aa15.21■□□□□ 0.02
USP39-208ENST00000455732 DPRXA6NFQ7 191 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 PRSS23O95084 383 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 CD3EP07766 207 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 ADORA3P0DMS8 318 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 CD99P14209 185 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 BSPH1Q075Z2 132 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 LGALS3BPQ08380 585 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 FOXD4Q12950 439 aaPredicted RBP15.2■□□□□ 0.02
USP39-208ENST00000455732 GLYATQ6IB77 296 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 ALKBH2Q6NS38 261 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 FKBP9P1Q75LS8 142 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 RNF148Q8N7C7 305 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 WDR31Q8NA23 367 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 OR52N5Q8NH56 324 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 PFN4Q8NHR9 129 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 MAGEE2Q8TD90 523 aaPredicted RBP15.2■□□□□ 0.02
USP39-208ENST00000455732 OBP2BQ9NPH6 170 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 MAN2C1Q9NTJ4 1040 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 DCAF13Q9NV06 445 aaKnown RBP15.2■□□□□ 0.02
USP39-208ENST00000455732 TAS2R5Q9NYW4 299 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 SAMD4AQ9UPU9 718 aaKnown RBP15.2■□□□□ 0.02
USP39-208ENST00000455732 MED31Q9Y3C7 131 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 MAGED1Q9Y5V3 778 aaPredicted RBP15.2■□□□□ 0.02
USP39-208ENST00000455732 SNX13Q9Y5W8 968 aa15.2■□□□□ 0.02
USP39-208ENST00000455732 HS3ST1O14792 307 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 FFAR1O14842 300 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 GMNNO75496 209 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 OR7A10O76100 309 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 OR6A2O95222 327 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 TSPAN19P0C672 248 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 AHCYP23526 432 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 ROR2Q01974 943 aaKnown RBP15.19■□□□□ 0.02
USP39-208ENST00000455732 HMBOX1Q6NT76 420 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 NANOGNBQ7Z5D8 188 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 C20orf196Q8IYI0 205 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 LRRC75A-AS1Q8N1F1 130 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 GPR137CQ8N3F9 429 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 LRRC17Q8N6Y2 441 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 FAM156AQ8NDB6 213 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 WFDC11Q8NEX6 87 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 OR1K1Q8NGR3 316 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 LILRB1Q8NHL6 650 aaPredicted RBP15.19■□□□□ 0.02
USP39-208ENST00000455732 SGTBQ96EQ0 304 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 CDRT15Q96T59 188 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 CCL19Q99731 98 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 FNDC11Q9BVV2 318 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 DLL4Q9NR61 685 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 C20orf141Q9NUB4 165 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 MED29Q9NX70 200 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 ENPP4Q9Y6X5 453 aa15.19■□□□□ 0.02
USP39-208ENST00000455732 SLC35F4A4IF30 521 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 J3KTA2 159 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 HIST1H2ABP04908 130 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 UMPSP11172 480 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 CALB2P22676 271 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 PAX7P23759 505 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 NKX6-1P78426 367 aaPredicted RBP15.18■□□□□ 0.02
USP39-208ENST00000455732 TRAM2Q15035 370 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 KRTAP21-3Q3LHN1 58 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 TBRG1Q3YBR2 411 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 KLHL17Q6TDP4 642 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 TMEM108Q6UXF1 575 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 HIST3H2AQ7L7L0 130 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 TSEN54Q7Z6J9 526 aaKnown RBP15.18■□□□□ 0.02
USP39-208ENST00000455732 DEFB107AQ8IZN7 70 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 ZNF611Q8N823 705 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 RBM15BQ8NDT2 890 aaKnown RBP15.18■□□□□ 0.02
USP39-208ENST00000455732 HIST1H2ACQ93077 130 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 NSL1Q96IY1 281 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 TXNDC15Q96J42 360 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 ADAD1Q96M93 576 aaKnown RBP15.18■□□□□ 0.02
USP39-208ENST00000455732 ANKRD19PQ9H560 264 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 GPR35Q9HC97 309 aa15.18■□□□□ 0.02
USP39-208ENST00000455732 ARPC4-TTLL3A0A0A6YYG9 625 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 C11orf98E9PRG8 122 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 RNF13O43567 381 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 SMPD2O60906 423 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 TMCC2O75069 709 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 WNT11O96014 354 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 HOXB1P14653 301 aaPredicted RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 IFNGR1P15260 489 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 FUT1P19526 365 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 TCN1P20061 433 aaPredicted RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 FUT4P22083 530 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 PTAFRP25105 342 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 YAP1P46937 504 aaKnown RBP15.17■□□□□ 0.02
USP39-208ENST00000455732 PRPS1P60891 318 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 MXRA7P84157 204 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 HIKESHIQ53FT3 197 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 SHEQ5VZ18 495 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 ANKRD16Q6P6B7 361 aa15.17■□□□□ 0.02
USP39-208ENST00000455732 KLHL24Q6TFL4 600 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms